Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8901 to 8925 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1982971
1982983
ACGCG
12
+
2
GCGAC
UKMR15_RS25535
1982878
1984086
+
Genic
-93
NZ_LR595897.1
1984212
1984230
ACGCGC
18
-
3
GTGCGC
UKMR15_RS25540
1984135
1985166
+
Genic
-77
NZ_LR595897.1
1984323
1984335
AATCG
12
+
2
CGAAT
UKMR15_RS25540
1984135
1985166
+
Genic
-188
NZ_LR595897.1
1984725
1984738
AGCGCG
13
-
2
CTCGCG
UKMR15_RS25540
1984135
1985166
+
Genic
-590
NZ_LR595897.1
1985191
1985203
CCGCG
12
-
2
CGGCG
UKMR15_RS25540
1984135
1985166
+
Intergenic
-1056
NZ_LR595897.1
1985959
1985989
ACCTGC
30
+
5
CCTGCA
UKMR15_RS25545
1985296
1985934
-
Intergenic
-663
NZ_LR595897.1
1986408
1986420
AAGCGG
12
-
2
TTCCGC
UKMR15_RS25555
1986374
1987279
+
Genic
-34
NZ_LR595897.1
1986836
1986848
CCG
12
-
4
CGG
UKMR15_RS25555
1986374
1987279
+
Genic
-462
NZ_LR595897.1
1986872
1986888
ATCGCG
16
+
2
TCGCGA
UKMR15_RS25555
1986374
1987279
+
Genic
-498
NZ_LR595897.1
1987235
1987248
AGCGCG
13
-
2
TCGCGC
UKMR15_RS25555
1986374
1987279
+
Genic
-861
NZ_LR595897.1
1987279
1987293
CCGCGG
14
+
2
CGCGGC
UKMR15_RS25555
1986374
1987279
+
Genic
-905
NZ_LR595897.1
1987425
1987444
ACCCCG
19
-
3
GGGTCG
UKMR15_RS25555
1986374
1987279
+
Intergenic
-1051
NZ_LR595897.1
1987569
1987582
AACGAT
13
-
2
GTTATC
nadE
1987870
1988724
+
Intergenic
288
NZ_LR595897.1
1988889
1988901
CCGCG
12
-
2
GCGCG
nadE
1987870
1988724
+
Intergenic
-1019
NZ_LR595897.1
1989254
1989267
CCGCG
13
+
2
CGCGC
nadE
1987870
1988724
+
Intergenic
-1384
NZ_LR595897.1
1989341
1989353
CCCCCG
12
+
2
CCCGCC
nadE
1987870
1988724
+
Intergenic
-1471
NZ_LR595897.1
1989754
1989768
ACGTCG
14
+
2
CGACGT
UKMR15_RS25570
1990115
1991332
+
Intergenic
347
NZ_LR595897.1
1990402
1990414
ATCGGC
12
+
2
ATCGGC
UKMR15_RS25570
1990115
1991332
+
Genic
-287
NZ_LR595897.1
1991329
1991341
AAGATG
12
+
2
TGAAGA
UKMR15_RS25570
1990115
1991332
+
Genic
-1214
NZ_LR595897.1
1991837
1991849
ATCGCG
12
+
2
CGCGAT
UKMR15_RS25575
1991335
1992177
+
Genic
-502
NZ_LR595897.1
1992684
1992697
CCGCG
13
+
2
CGCCG
UKMR15_RS25580
1992223
1992663
+
Intergenic
-461
NZ_LR595897.1
1994241
1994253
CCGCG
12
+
2
GCGCC
nirK
1993083
1994618
+
Genic
-1158
NZ_LR595897.1
1995106
1995118
ACGCG
12
+
2
CGACG
UKMR15_RS25590
1994643
1995479
+
Genic
-463
NZ_LR595897.1
1995335
1995347
CCCGCG
12
-
2
GGCGCG
UKMR15_RS25590
1994643
1995479
+
Genic
-692
NZ_LR595897.1
1996273
1996286
CCCCCG
13
+
2
CCCGCC
UKMR15_RS25595
1995476
1996090
+
Intergenic
-797