Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8926 to 8950 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1996799
1996812
AAGCG
13
-
2
CGCTT
UKMR15_RS25600
1996851
1997027
-
Intergenic
39
NZ_LR595897.1
1997162
1997174
AACGCG
12
+
2
CGCGAA
UKMR15_RS25605
1997128
1998153
+
Genic
-34
NZ_LR595897.1
1998193
1998205
CCG
12
+
4
CGC
UKMR15_RS25605
1997128
1998153
+
Intergenic
-1065
NZ_LR595897.1
1999144
1999158
AGCGC
14
-
2
GCGCT
UKMR15_RS25610
1998281
1999681
+
Genic
-863
NZ_LR595897.1
1999236
1999248
AAGGCG
12
-
2
TTCGCC
UKMR15_RS25610
1998281
1999681
+
Genic
-955
NZ_LR595897.1
1999518
1999530
ATCGGC
12
-
2
CGATGC
UKMR15_RS25610
1998281
1999681
+
Genic
-1237
NZ_LR595897.1
1999933
1999945
CCCCCG
12
+
2
CCCGCC
UKMR15_RS25610
1998281
1999681
+
Intergenic
-1652
NZ_LR595897.1
2000516
2000530
AGGGGC
14
-
2
CCTGCC
UKMR15_RS25615
2000616
2001254
+
Intergenic
86
NZ_LR595897.1
2001105
2001117
ACGCCG
12
-
2
TCGGCG
UKMR15_RS25615
2000616
2001254
+
Genic
-489
NZ_LR595897.1
2001659
2001671
ACGCGC
12
+
2
CGCGCA
UKMR15_RS25620
2001334
2001711
+
Genic
-325
NZ_LR595897.1
2002476
2002488
ACGCG
12
-
2
CGCGT
UKMR15_RS25620
2001334
2001711
+
Intergenic
-1142
NZ_LR595897.1
2002964
2002977
AACGCG
13
-
2
GCGTTC
UKMR15_RS25630
2003815
2004552
-
Intergenic
838
NZ_LR595897.1
2003084
2003096
AGGCCG
12
-
2
TCGGCC
UKMR15_RS25630
2003815
2004552
-
Intergenic
719
NZ_LR595897.1
2003773
2003785
CG
12
+
6
GC
UKMR15_RS25630
2003815
2004552
-
Intergenic
30
NZ_LR595897.1
2004098
2004110
AACATG
12
-
2
TGTTCA
UKMR15_RS25630
2003815
2004552
-
Genic
-283
NZ_LR595897.1
2004354
2004366
ACGGCG
12
-
2
GCCGTC
UKMR15_RS25630
2003815
2004552
-
Genic
-539
NZ_LR595897.1
2005438
2005451
ATCGCG
13
+
2
TCGCGA
UKMR15_RS25635
2004549
2006393
-
Genic
-889
NZ_LR595897.1
2005797
2005809
AGCGCG
12
+
2
AGCGCG
UKMR15_RS25635
2004549
2006393
-
Genic
-1248
NZ_LR595897.1
2005915
2005927
AGC
12
+
4
GCA
UKMR15_RS25635
2004549
2006393
-
Genic
-1366
NZ_LR595897.1
2006249
2006262
AGC
13
+
4
CAG
UKMR15_RS25635
2004549
2006393
-
Genic
-1700
NZ_LR595897.1
2006751
2006764
ACGAGC
13
-
2
GTGCTC
tssB
2006653
2007147
+
Genic
-98
NZ_LR595897.1
2008022
2008037
AACGCG
15
-
2
GCGTTC
tssC
2007144
2008670
+
Genic
-878
NZ_LR595897.1
2008705
2008717
CCCGG
12
+
2
GCCCG
tssC
2007144
2008670
+
Intergenic
-1561
NZ_LR595897.1
2009040
2009053
CCG
13
+
4
CCG
UKMR15_RS25650
2008890
2009399
+
Genic
-150
NZ_LR595897.1
2010993
2011006
CCGCG
13
+
2
CGCCG
tssF
2009890
2011632
+
Genic
-1103