Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8976 to 9000 repeats of 10659
Go To:
<<
<
358
359
360
361
362
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2026840
2026852
CCGCG
12
+
2
CCGCG
tssM-5
2026543
2030562
+
Genic
-297
NZ_LR595897.1
2028210
2028223
CCGCG
13
-
2
CGGCG
tssM-5
2026543
2030562
+
Genic
-1667
NZ_LR595897.1
2028512
2028527
CCGGCG
15
+
2
CGCCGG
tssM-5
2026543
2030562
+
Genic
-1969
NZ_LR595897.1
2028554
2028566
ATCGCG
12
+
2
TCGCGA
tssM-5
2026543
2030562
+
Genic
-2011
NZ_LR595897.1
2029748
2029760
CCGCG
12
-
2
CGGCG
tssM-5
2026543
2030562
+
Genic
-3205
NZ_LR595897.1
2030122
2030134
ACGCG
12
+
2
GCGAC
tssM-5
2026543
2030562
+
Genic
-3579
NZ_LR595897.1
2037111
2037123
AAATTG
12
-
2
TTTCAA
UKMR15_RS25750
2036762
2037049
-
Intergenic
-349
NZ_LR595897.1
2038050
2038064
CCGCG
14
-
2
GCGCG
UKMR15_RS25760
2038034
2039026
-
Genic
-16
NZ_LR595897.1
2038378
2038393
CCGCG
15
+
3
CGCGC
UKMR15_RS25760
2038034
2039026
-
Genic
-344
NZ_LR595897.1
2039095
2039207
ACTGCG
112
-
18
GTCGCA
UKMR15_RS25760
2038034
2039026
-
Intergenic
-1061
NZ_LR595897.1
2039372
2039384
CCGCG
12
-
2
CGGCG
UKMR15_RS25765
2039568
2040011
-
Intergenic
184
NZ_LR595897.1
2039975
2039987
AAGCGC
12
-
2
TTGCGC
UKMR15_RS25765
2039568
2040011
-
Genic
-407
NZ_LR595897.1
2041207
2041219
ACGCCG
12
-
2
GCGTCG
sicP
2041156
2041611
-
Genic
-51
NZ_LR595897.1
2041358
2041372
AGGCCG
14
+
2
CGAGGC
sicP
2041156
2041611
-
Genic
-202
NZ_LR595897.1
2044295
2044307
AAGCG
12
+
2
AGCGA
UKMR15_RS25790
2043927
2044712
+
Genic
-368
NZ_LR595897.1
2046740
2046752
CG
12
+
6
GC
bapA
2046010
2048673
-
Genic
-730
NZ_LR595897.1
2046958
2046974
CCGGCG
16
+
2
GCGCCG
bapA
2046010
2048673
-
Genic
-948
NZ_LR595897.1
2047582
2047596
AACGTG
14
-
2
TTCACG
bapA
2046010
2048673
-
Genic
-1572
NZ_LR595897.1
2048089
2048101
AACGCG
12
-
2
TTCGCG
bapA
2046010
2048673
-
Genic
-2079
NZ_LR595897.1
2048358
2048370
CCCCCG
12
+
2
CGCCCC
bapA
2046010
2048673
-
Genic
-2348
NZ_LR595897.1
2048479
2048492
CCCGCG
13
-
2
GGCGCG
bapA
2046010
2048673
-
Genic
-2469
NZ_LR595897.1
2048507
2048520
CCGCG
13
+
2
CGCCG
bapA
2046010
2048673
-
Genic
-2497
NZ_LR595897.1
2048718
2048730
CCCGCG
12
+
2
CCGCGC
bipD
2048773
2049705
-
Intergenic
43
NZ_LR595897.1
2050740
2050752
ACATCG
12
+
2
ATCGAC
bipC
2050191
2051450
-
Genic
-549
NZ_LR595897.1
2051272
2051285
CCGCG
13
+
2
CGCGC
bipC
2050191
2051450
-
Genic
-1081