Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9026 to 9050 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2062419
2062431
ACATCG
12
-
2
TGTCGA
bsaQ
2061419
2063491
-
Genic
-1000
NZ_LR595897.1
2062563
2062578
AGCGCG
15
+
2
CGAGCG
bsaQ
2061419
2063491
-
Genic
-1144
NZ_LR595897.1
2062621
2062634
AGCGCG
13
+
2
CGCGAG
bsaQ
2061419
2063491
-
Genic
-1202
NZ_LR595897.1
2063127
2063139
ACGATC
12
+
2
TCACGA
bsaQ
2061419
2063491
-
Genic
-1708
NZ_LR595897.1
2063391
2063403
AGCGGC
12
+
2
GCGGCA
bsaQ
2061419
2063491
-
Genic
-1972
NZ_LR595897.1
2063614
2063626
ACGCCG
12
-
2
GCGTCG
bsaP
2063527
2064648
-
Genic
-87
NZ_LR595897.1
2064606
2064618
CCGCG
12
+
2
GCCGC
bsaP
2063527
2064648
-
Genic
-1079
NZ_LR595897.1
2064748
2064760
CCCGCG
12
+
2
CCGCGC
bsaO
2064645
2066522
-
Genic
-103
NZ_LR595897.1
2065929
2065941
CCG
12
-
4
GCG
bsaO
2064645
2066522
-
Genic
-1284
NZ_LR595897.1
2066111
2066123
ACATCT
12
-
2
GTAGAT
bsaO
2064645
2066522
-
Genic
-1466
NZ_LR595897.1
2068726
2068739
CCGCG
13
-
2
GCGCG
UKMR15_RS25905
2067686
2068972
+
Genic
-1040
NZ_LR595897.1
2069271
2069285
CCGCG
14
+
2
GCCGC
UKMR15_RS25915
2069298
2069600
+
Intergenic
13
NZ_LR595897.1
2069639
2069651
AGC
12
-
4
GCT
basJ
2069605
2070552
+
Genic
-34
NZ_LR595897.1
2071992
2072005
ACCCCG
13
+
2
CCCCGA
UKMR15_RS25935
2071850
2072050
+
Genic
-142
NZ_LR595897.1
2072030
2072042
AACGGC
12
+
2
ACGGCA
UKMR15_RS25935
2071850
2072050
+
Genic
-180
NZ_LR595897.1
2072061
2072073
CCCGCG
12
+
2
CGCCCG
UKMR15_RS25935
2071850
2072050
+
Intergenic
-211
NZ_LR595897.1
2072106
2072121
CCGCG
15
+
3
GCCGC
UKMR15_RS25935
2071850
2072050
+
Intergenic
-256
NZ_LR595897.1
2072483
2072495
CCCG
12
+
3
CGCC
UKMR15_RS25940
2072418
2072609
+
Genic
-65
NZ_LR595897.1
2075040
2075053
ACCGC
13
+
2
CGCAC
UKMR15_RS25955
2074701
2075084
+
Genic
-339
NZ_LR595897.1
2075068
2075081
CCCCG
13
+
2
GCCCC
UKMR15_RS25955
2074701
2075084
+
Genic
-367
NZ_LR595897.1
2075436
2075448
CCGCGG
12
+
2
CGGCCG
UKMR15_RS25960
2075355
2077052
+
Genic
-81
NZ_LR595897.1
2075804
2075816
ACGCG
12
-
2
CGCGT
UKMR15_RS25960
2075355
2077052
+
Genic
-449
NZ_LR595897.1
2076417
2076430
ACGGCG
13
+
2
ACGGCG
UKMR15_RS25960
2075355
2077052
+
Genic
-1062
NZ_LR595897.1
2077114
2077126
ATCGGC
12
-
2
ATGCCG
UKMR15_RS25960
2075355
2077052
+
Intergenic
-1759
NZ_LR595897.1
2077367
2077380
ATCGC
13
-
2
CGATG
UKMR15_RS25960
2075355
2077052
+
Intergenic
-2012