Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9051 to 9075 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2078112
2078124
CCCGCG
12
+
2
CGCCCG
UKMR15_RS25965
2078174
2078812
-
Intergenic
50
NZ_LR595897.1
2078154
2078166
AGCGCG
12
-
2
CGCGCT
UKMR15_RS25965
2078174
2078812
-
Intergenic
8
NZ_LR595897.1
2078578
2078590
AACAGC
12
+
2
CAACAG
UKMR15_RS25965
2078174
2078812
-
Genic
-404
NZ_LR595897.1
2078590
2078603
CCGGCG
13
+
2
GCCGGC
UKMR15_RS25965
2078174
2078812
-
Genic
-416
NZ_LR595897.1
2080368
2080380
ATCGGC
12
+
2
GCATCG
UKMR15_RS25975
2080014
2081333
+
Genic
-354
NZ_LR595897.1
2081038
2081050
AGCGCG
12
-
2
CGCGCT
UKMR15_RS25975
2080014
2081333
+
Genic
-1024
NZ_LR595897.1
2081958
2081970
AGCCCG
12
+
2
GCCCGA
UKMR15_RS25980
2081671
2082558
-
Genic
-287
NZ_LR595897.1
2082257
2082269
ACGCCG
12
+
2
CGCCGA
UKMR15_RS25980
2081671
2082558
-
Genic
-586
NZ_LR595897.1
2084813
2084826
ACGCCG
13
-
2
GTCGGC
UKMR15_RS25990
2084006
2085670
-
Genic
-807
NZ_LR595897.1
2085755
2085769
AGCGGC
14
-
2
GCCGCT
UKMR15_RS25995
2085838
2086395
-
Intergenic
69
NZ_LR595897.1
2086076
2086088
AGCGCC
12
+
2
GCGCCA
UKMR15_RS25995
2085838
2086395
-
Genic
-238
NZ_LR595897.1
2086348
2086361
CCGCGG
13
+
2
CCGCGG
UKMR15_RS25995
2085838
2086395
-
Genic
-510
NZ_LR595897.1
2088583
2088596
ACGAGC
13
+
2
CGAGCA
UKMR15_RS26005
2088438
2089064
-
Genic
-145
NZ_LR595897.1
2088916
2088929
AGCCCG
13
+
2
CGAGCC
UKMR15_RS26005
2088438
2089064
-
Genic
-478
NZ_LR595897.1
2089788
2089800
AGGCGC
12
-
2
CTGCGC
UKMR15_RS26010
2089198
2089662
+
Intergenic
-590
NZ_LR595897.1
2090048
2090060
CCCG
12
+
3
CGCC
UKMR15_RS26010
2089198
2089662
+
Intergenic
-850
NZ_LR595897.1
2090675
2090687
CCCGCG
12
+
2
CCCGCG
UKMR15_RS26020
2090808
2092394
+
Intergenic
121
NZ_LR595897.1
2091614
2091626
AGGATC
12
-
2
CTGATC
UKMR15_RS26020
2090808
2092394
+
Genic
-806
NZ_LR595897.1
2091801
2091813
ACGCG
12
+
2
GCGAC
UKMR15_RS26020
2090808
2092394
+
Genic
-993
NZ_LR595897.1
2091957
2091970
CCGG
13
+
3
CCGG
UKMR15_RS26020
2090808
2092394
+
Genic
-1149
NZ_LR595897.1
2092073
2092085
AGGCCG
12
-
2
CTCGGC
UKMR15_RS26020
2090808
2092394
+
Genic
-1265
NZ_LR595897.1
2092601
2092614
CCGCG
13
-
2
GCGGC
UKMR15_RS26025
2092544
2093326
+
Genic
-57
NZ_LR595897.1
2093391
2093405
ACGCGC
14
+
2
GCGCAC
UKMR15_RS26025
2092544
2093326
+
Intergenic
-847
NZ_LR595897.1
2095876
2095888
AAATG
12
+
2
AAATG
UKMR15_RS26035
2095841
2096110
-
Genic
-35
NZ_LR595897.1
2096681
2096693
ATCGGC
12
-
2
CGATGC
UKMR15_RS26040
2096284
2096976
+
Genic
-397