Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9301 to 9325 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2222487
2222501
ACGTCG
14
+
2
GTCGAC
UKMR15_RS26425
2222905
2223432
-
Intergenic
404
NZ_LR595897.1
2224647
2224659
ACGCCG
12
+
2
ACGCCG
UKMR15_RS26435
2224455
2225366
-
Genic
-192
NZ_LR595897.1
2225060
2225072
AACACC
12
-
2
GTTGGT
UKMR15_RS26435
2224455
2225366
-
Genic
-605
NZ_LR595897.1
2226616
2226629
AAGCCG
13
-
2
CTTCGG
UKMR15_RS26450
2225928
2226848
-
Genic
-688
NZ_LR595897.1
2227453
2227465
AGCGCG
12
-
2
GCTCGC
UKMR15_RS26455
2226957
2228354
+
Genic
-496
NZ_LR595897.1
2227479
2227492
AGCGCG
13
-
2
CGCTCG
UKMR15_RS26455
2226957
2228354
+
Genic
-522
NZ_LR595897.1
2227604
2227617
CCGCG
13
-
2
CGGCG
UKMR15_RS26455
2226957
2228354
+
Genic
-647
NZ_LR595897.1
2227610
2227622
CCCGCG
12
-
2
GGCGCG
UKMR15_RS26455
2226957
2228354
+
Genic
-653
NZ_LR595897.1
2227636
2227648
AGCGCG
12
-
2
GCTCGC
UKMR15_RS26455
2226957
2228354
+
Genic
-679
NZ_LR595897.1
2227959
2227971
ATCGGC
12
+
2
GCATCG
UKMR15_RS26455
2226957
2228354
+
Genic
-1002
NZ_LR595897.1
2228263
2228278
AGCGGC
15
-
2
GCTGCC
UKMR15_RS26455
2226957
2228354
+
Genic
-1306
NZ_LR595897.1
2228285
2228297
AGCCG
12
-
2
CGGCT
UKMR15_RS26455
2226957
2228354
+
Genic
-1328
NZ_LR595897.1
2228337
2228349
AATCG
12
+
2
AATCG
UKMR15_RS26455
2226957
2228354
+
Genic
-1380
NZ_LR595897.1
2228490
2228504
CCGCG
14
-
2
GCGCG
UKMR15_RS26460
2228351
2228749
+
Genic
-139
NZ_LR595897.1
2228865
2228878
ACGCG
13
-
2
TCGCG
UKMR15_RS26465
2228912
2230081
-
Intergenic
34
NZ_LR595897.1
2229047
2229059
AGCCCG
12
+
2
AGCCCG
UKMR15_RS26465
2228912
2230081
-
Genic
-135
NZ_LR595897.1
2229144
2229156
ATCGCG
12
+
2
CGATCG
UKMR15_RS26465
2228912
2230081
-
Genic
-232
NZ_LR595897.1
2229725
2229737
AGGCGC
12
-
2
TGCGCC
UKMR15_RS26465
2228912
2230081
-
Genic
-813
NZ_LR595897.1
2231301
2231313
ACGGCG
12
-
2
TCGCCG
UKMR15_RS26475
2231325
2232752
-
Intergenic
12
NZ_LR595897.1
2232001
2232014
AGCGCG
13
+
2
CGAGCG
UKMR15_RS26475
2231325
2232752
-
Genic
-676
NZ_LR595897.1
2232710
2232722
ATATCG
12
+
2
TATCGA
UKMR15_RS26475
2231325
2232752
-
Genic
-1385
NZ_LR595897.1
2233306
2233318
CCCGCG
12
-
2
CGGGCG
UKMR15_RS26485
2233138
2235558
+
Genic
-168
NZ_LR595897.1
2233588
2233600
CCGCG
12
-
2
GCGGC
UKMR15_RS26485
2233138
2235558
+
Genic
-450
NZ_LR595897.1
2233619
2233632
CCCGCG
13
-
2
GGGCGC
UKMR15_RS26485
2233138
2235558
+
Genic
-481
NZ_LR595897.1
2234243
2234258
ACGCAG
15
+
2
GACGCA
UKMR15_RS26485
2233138
2235558
+
Genic
-1105