Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9276 to 9300 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2195681
2195694
CCCG
13
+
3
CCGC
UKMR15_RS26390
2191809
2205155
-
Genic
-3872
NZ_LR595897.1
2196455
2196468
AGCGCG
13
+
2
CGCGAG
UKMR15_RS26390
2191809
2205155
-
Genic
-4646
NZ_LR595897.1
2197224
2197237
AGCGCG
13
+
2
GCGAGC
UKMR15_RS26390
2191809
2205155
-
Genic
-5415
NZ_LR595897.1
2197346
2197358
ATGCCC
12
+
2
CATGCC
UKMR15_RS26390
2191809
2205155
-
Genic
-5537
NZ_LR595897.1
2197927
2197939
AGATCG
12
+
2
GATCGA
UKMR15_RS26390
2191809
2205155
-
Genic
-6118
NZ_LR595897.1
2198318
2198331
ATCG
13
+
3
GATC
UKMR15_RS26390
2191809
2205155
-
Genic
-6509
NZ_LR595897.1
2198757
2198771
AACAGC
14
-
2
GCTGTT
UKMR15_RS26390
2191809
2205155
-
Genic
-6948
NZ_LR595897.1
2198807
2198819
AGGGCG
12
+
2
GGGCGA
UKMR15_RS26390
2191809
2205155
-
Genic
-6998
NZ_LR595897.1
2199044
2199057
CCCG
13
+
3
CCGC
UKMR15_RS26390
2191809
2205155
-
Genic
-7235
NZ_LR595897.1
2199123
2199135
CCCCG
12
+
2
CCCGC
UKMR15_RS26390
2191809
2205155
-
Genic
-7314
NZ_LR595897.1
2199834
2199846
AGCGC
12
+
2
CAGCG
UKMR15_RS26390
2191809
2205155
-
Genic
-8025
NZ_LR595897.1
2200638
2200650
AGGCGC
12
-
2
TGCGCC
UKMR15_RS26390
2191809
2205155
-
Genic
-8829
NZ_LR595897.1
2200960
2200973
ACGCGG
13
+
2
GCGGAC
UKMR15_RS26390
2191809
2205155
-
Genic
-9151
NZ_LR595897.1
2202128
2202140
AGGGCG
12
+
2
GGGCGA
UKMR15_RS26390
2191809
2205155
-
Genic
-10319
NZ_LR595897.1
2202365
2202378
CCCG
13
+
3
CCGC
UKMR15_RS26390
2191809
2205155
-
Genic
-10556
NZ_LR595897.1
2204984
2204996
CCGCG
12
+
2
CGCGC
UKMR15_RS26390
2191809
2205155
-
Genic
-13175
NZ_LR595897.1
2206109
2206121
ACGCCC
12
+
2
CACGCC
UKMR15_RS26395
2205152
2214985
-
Genic
-957
NZ_LR595897.1
2207465
2207477
AGGCGC
12
-
2
TGCGCC
UKMR15_RS26395
2205152
2214985
-
Genic
-2313
NZ_LR595897.1
2207787
2207800
ACGCGG
13
+
2
GCGGAC
UKMR15_RS26395
2205152
2214985
-
Genic
-2635
NZ_LR595897.1
2212592
2212604
ACGCCC
12
+
2
CACGCC
UKMR15_RS26395
2205152
2214985
-
Genic
-7440
NZ_LR595897.1
2216762
2216776
CCCGCG
14
+
2
GCCCGC
UKMR15_RS26400
2215291
2218074
-
Genic
-1471
NZ_LR595897.1
2217413
2217425
AGGGCG
12
-
2
CGCCCT
UKMR15_RS26400
2215291
2218074
-
Genic
-2122
NZ_LR595897.1
2217812
2217824
AATTCG
12
+
2
CGAATT
UKMR15_RS26400
2215291
2218074
-
Genic
-2521
NZ_LR595897.1
2218354
2218366
CCGG
12
+
3
CGGC
UKMR15_RS26405
2218289
2218537
-
Genic
-65
NZ_LR595897.1
2220966
2220978
ACGCCG
12
-
2
TCGGCG
poxB
2219814
2221532
-
Genic
-1152