Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9226 to 9250 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2165820
2165832
CCCGCG
12
-
2
GGCGCG
sctJ
2165062
2165910
+
Genic
-758
NZ_LR595897.1
2166079
2166093
AGC
14
-
4
GCT
UKMR15_RS26345
2165907
2166584
+
Genic
-172
NZ_LR595897.1
2166325
2166341
AGCGCG
16
+
2
GCGCGA
UKMR15_RS26345
2165907
2166584
+
Genic
-418
NZ_LR595897.1
2166509
2166522
ACGCGG
13
+
2
GCGGAC
UKMR15_RS26345
2165907
2166584
+
Genic
-602
NZ_LR595897.1
2166758
2166770
CG
12
+
6
GC
sctL
2166569
2167285
+
Genic
-189
NZ_LR595897.1
2168127
2168139
CCGCG
12
-
2
GCGCG
sctN
2167282
2168610
+
Genic
-845
NZ_LR595897.1
2168404
2168416
CCGG
12
+
3
CGGC
sctN
2167282
2168610
+
Genic
-1122
NZ_LR595897.1
2168741
2168756
ACGCGC
15
+
2
GCGCAC
UKMR15_RS26360
2168607
2169134
+
Genic
-134
NZ_LR595897.1
2169482
2169494
AGATGC
12
+
2
TGCAGA
UKMR15_RS26360
2168607
2169134
+
Intergenic
-875
NZ_LR595897.1
2170359
2170371
CCGGCG
12
+
2
CGGCGC
UKMR15_RS26370
2170115
2170492
-
Genic
-244
NZ_LR595897.1
2171137
2171149
CCGGCG
12
+
2
GCCGGC
UKMR15_RS26375
2170499
2172265
+
Genic
-638
NZ_LR595897.1
2171576
2171589
AGCGCG
13
-
2
TCGCGC
UKMR15_RS26375
2170499
2172265
+
Genic
-1077
NZ_LR595897.1
2172412
2172424
CCGCG
12
-
2
GCGGC
UKMR15_RS26380
2172510
2173463
-
Intergenic
86
NZ_LR595897.1
2172491
2172505
ACGCGC
14
-
2
GCGTGC
UKMR15_RS26380
2172510
2173463
-
Intergenic
5
NZ_LR595897.1
2173491
2173504
CCGCG
13
-
2
GCGGC
UKMR15_RS26385
2173531
2191812
-
Intergenic
27
NZ_LR595897.1
2173517
2173529
AACCG
12
-
2
CGGTT
UKMR15_RS26385
2173531
2191812
-
Intergenic
2
NZ_LR595897.1
2173707
2173719
ACGCGG
12
-
2
GTCCGC
UKMR15_RS26385
2173531
2191812
-
Genic
-176
NZ_LR595897.1
2174148
2174160
CCGCG
12
-
2
GCGCG
UKMR15_RS26385
2173531
2191812
-
Genic
-617
NZ_LR595897.1
2176325
2176337
ATCGGC
12
-
2
CGATGC
UKMR15_RS26385
2173531
2191812
-
Genic
-2794
NZ_LR595897.1
2176399
2176411
AACGCG
12
+
2
GCGAAC
UKMR15_RS26385
2173531
2191812
-
Genic
-2868
NZ_LR595897.1
2176574
2176586
ACGGCC
12
+
2
ACGGCC
UKMR15_RS26385
2173531
2191812
-
Genic
-3043
NZ_LR595897.1
2177783
2177795
CCGCG
12
+
2
GCGCC
UKMR15_RS26385
2173531
2191812
-
Genic
-4252
NZ_LR595897.1
2178227
2178239
ACGTCG
12
+
2
CGTCGA
UKMR15_RS26385
2173531
2191812
-
Genic
-4696
NZ_LR595897.1
2179946
2179961
AGCGCG
15
+
2
CGAGCG
UKMR15_RS26385
2173531
2191812
-
Genic
-6415
NZ_LR595897.1
2180495
2180508
AGCGCG
13
+
2
GCGCGA
UKMR15_RS26385
2173531
2191812
-
Genic
-6964