Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9201 to 9225 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2157484
2157496
ACGCGC
12
-
2
CGTGCG
UKMR15_RS26295
2156907
2157776
-
Genic
-577
NZ_LR595897.1
2157545
2157561
CCGGCG
16
+
2
GCGCCG
UKMR15_RS26295
2156907
2157776
-
Genic
-638
NZ_LR595897.1
2157854
2157867
ACCGTC
13
+
2
GTCACC
sctS
2157773
2158036
-
Genic
-81
NZ_LR595897.1
2158331
2158344
CCGCGG
13
+
2
CGCGGC
sctR
2158077
2158727
-
Genic
-254
NZ_LR595897.1
2158385
2158398
AGCGCG
13
-
2
CTCGCG
sctR
2158077
2158727
-
Genic
-308
NZ_LR595897.1
2158893
2158907
ACAGCG
14
+
2
CGACAG
sctQ
2158714
2160024
-
Genic
-179
NZ_LR595897.1
2159224
2159238
ACGATG
14
-
2
GTCATC
sctQ
2158714
2160024
-
Genic
-510
NZ_LR595897.1
2159524
2159537
AGCGC
13
+
2
GCGCA
sctQ
2158714
2160024
-
Genic
-810
NZ_LR595897.1
2159569
2159581
ACGCG
12
-
2
CGCGT
sctQ
2158714
2160024
-
Genic
-855
NZ_LR595897.1
2159723
2159735
CCCGCG
12
-
2
GCGCGG
sctQ
2158714
2160024
-
Genic
-1009
NZ_LR595897.1
2159950
2159963
AGCGGC
13
+
2
GGCAGC
sctQ
2158714
2160024
-
Genic
-1236
NZ_LR595897.1
2160063
2160075
AGATCG
12
-
2
TCGATC
sctP
2160054
2160665
-
Genic
-9
NZ_LR595897.1
2160495
2160507
ACGGCG
12
-
2
TCGCCG
sctP
2160054
2160665
-
Genic
-441
NZ_LR595897.1
2160510
2160522
CCCGCG
12
-
2
GGCGCG
sctP
2160054
2160665
-
Genic
-456
NZ_LR595897.1
2160569
2160581
CCGCG
12
+
2
GCCGC
sctP
2160054
2160665
-
Genic
-515
NZ_LR595897.1
2160587
2160599
CCGGCG
12
+
2
CGGCGC
sctP
2160054
2160665
-
Genic
-533
NZ_LR595897.1
2161055
2161067
AAGGAG
12
-
2
TCCTTC
sctV
2160662
2162734
-
Genic
-393
NZ_LR595897.1
2161933
2161946
ACGGCG
13
-
2
GCCGTC
sctV
2160662
2162734
-
Genic
-1271
NZ_LR595897.1
2162637
2162650
AGCGGC
13
+
2
GCGGCA
sctV
2160662
2162734
-
Genic
-1975
NZ_LR595897.1
2162903
2162915
ACGCGC
12
-
2
GCGCGT
sctU
2162731
2163813
-
Genic
-172
NZ_LR595897.1
2162923
2162935
AGCGCG
12
+
2
AGCGCG
sctU
2162731
2163813
-
Genic
-192
NZ_LR595897.1
2164331
2164346
AGCGCG
15
-
2
GCTCGC
UKMR15_RS26330
2164048
2164629
+
Genic
-283
NZ_LR595897.1
2164812
2164824
ACGCGC
12
+
2
CGCGCA
UKMR15_RS26335
2164643
2165059
+
Genic
-169
NZ_LR595897.1
2165098
2165111
CCGCG
13
+
2
CGCGC
sctJ
2165062
2165910
+
Genic
-36
NZ_LR595897.1
2165812
2165824
CCG
12
-
4
GCG
sctJ
2165062
2165910
+
Genic
-750