Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9151 to 9175 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2130247
2130259
CCGG
12
+
3
GCCG
UKMR15_RS26165
2129566
2130366
+
Genic
-681
NZ_LR595897.1
2130334
2130346
CCCGCG
12
+
2
CCGCGC
UKMR15_RS26165
2129566
2130366
+
Genic
-768
NZ_LR595897.1
2130417
2130429
ATCGCC
12
+
2
CATCGC
UKMR15_RS26165
2129566
2130366
+
Intergenic
-851
NZ_LR595897.1
2130644
2130657
AAGCCG
13
+
2
GAAGCC
UKMR15_RS26170
2130621
2130851
+
Genic
-23
NZ_LR595897.1
2130835
2130847
AAGCGC
12
+
2
GCGCAA
UKMR15_RS26170
2130621
2130851
+
Genic
-214
NZ_LR595897.1
2131549
2131561
AGCGCG
12
-
2
GCTCGC
UKMR15_RS26175
2131002
2131886
+
Genic
-547
NZ_LR595897.1
2131862
2131877
AGAGAT
15
-
2
CTCTAT
UKMR15_RS26175
2131002
2131886
+
Genic
-860
NZ_LR595897.1
2131924
2131939
CCGCG
15
-
3
CGGCG
sctC
2131954
2133753
-
Intergenic
15
NZ_LR595897.1
2132694
2132707
AGATCG
13
-
2
CTCGAT
sctC
2131954
2133753
-
Genic
-740
NZ_LR595897.1
2133057
2133071
CCGCG
14
-
2
CGGCG
sctC
2131954
2133753
-
Genic
-1103
NZ_LR595897.1
2133537
2133549
AAGATG
12
-
2
CATCTT
sctC
2131954
2133753
-
Genic
-1583
NZ_LR595897.1
2134897
2134912
ACGCCG
15
+
2
CGCCGA
pilV
2133870
2135552
-
Genic
-1027
NZ_LR595897.1
2136470
2136482
AGCCG
12
+
2
GCCGA
UKMR15_RS26195
2136071
2136625
-
Genic
-399
NZ_LR595897.1
2136497
2136509
ACGATC
12
+
2
ACGATC
UKMR15_RS26195
2136071
2136625
-
Genic
-426
NZ_LR595897.1
2137190
2137202
ACG
12
+
4
CGA
UKMR15_RS26200
2136658
2137734
-
Genic
-532
NZ_LR595897.1
2138057
2138069
AGCCGC
12
+
2
AGCCGC
tadA
2137724
2139334
-
Genic
-333
NZ_LR595897.1
2141189
2141201
ACGATC
12
+
2
GATCAC
pilO2
2139844
2141142
-
Intergenic
-1345
NZ_LR595897.1
2141641
2141653
ACGCCG
12
+
2
CCGACG
pilO2
2139844
2141142
-
Intergenic
-1797
NZ_LR595897.1
2142391
2142403
CCG
12
+
4
GCC
pilO2
2139844
2141142
-
Intergenic
-2547
NZ_LR595897.1
2142409
2142421
CCCGCG
12
+
2
GCCCGC
pilO2
2139844
2141142
-
Intergenic
-2565
NZ_LR595897.1
2143459
2143471
CCGCGG
12
+
2
CGCGGC
tadA
2143809
2144915
+
Intergenic
338
NZ_LR595897.1
2143820
2143832
CCG
12
+
4
GCC
tadA
2143809
2144915
+
Genic
-11
NZ_LR595897.1
2144146
2144158
AGCGGC
12
-
2
GCCGCT
tadA
2143809
2144915
+
Genic
-337
NZ_LR595897.1
2144695
2144708
AAC
13
+
4
CAA
tadA
2143809
2144915
+
Genic
-886
NZ_LR595897.1
2145263
2145276
CCGCGG
13
+
2
CGGCCG
UKMR15_RS26235
2145136
2146908
-
Genic
-127