Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9176 to 9200 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2145600
2145612
AGCCGC
12
+
2
CAGCCG
UKMR15_RS26235
2145136
2146908
-
Genic
-464
NZ_LR595897.1
2146239
2146253
CCGCG
14
-
2
GCGCG
UKMR15_RS26235
2145136
2146908
-
Genic
-1103
NZ_LR595897.1
2146307
2146320
ACGGCG
13
-
2
CGTCGC
UKMR15_RS26235
2145136
2146908
-
Genic
-1171
NZ_LR595897.1
2146347
2146360
CG
13
+
6
CG
UKMR15_RS26235
2145136
2146908
-
Genic
-1211
NZ_LR595897.1
2146721
2146733
ACGTCG
12
+
2
CGTCGA
UKMR15_RS26235
2145136
2146908
-
Genic
-1585
NZ_LR595897.1
2146857
2146874
AGCGCG
17
+
2
CGCGAG
UKMR15_RS26235
2145136
2146908
-
Genic
-1721
NZ_LR595897.1
2146926
2146938
ACGCGG
12
-
2
TCCGCG
UKMR15_RS26240
2146905
2147654
-
Genic
-21
NZ_LR595897.1
2147596
2147608
ACG
12
+
4
CGA
UKMR15_RS26240
2146905
2147654
-
Genic
-691
NZ_LR595897.1
2147761
2147773
CCGCG
12
-
2
GCGGC
UKMR15_RS26245
2147706
2148785
-
Genic
-55
NZ_LR595897.1
2147773
2147786
CCGGCG
13
+
2
CCGGCG
UKMR15_RS26245
2147706
2148785
-
Genic
-67
NZ_LR595897.1
2147826
2147838
AATCG
12
-
2
CGATT
UKMR15_RS26245
2147706
2148785
-
Genic
-120
NZ_LR595897.1
2148430
2148443
ACGCG
13
+
2
GCGAC
UKMR15_RS26245
2147706
2148785
-
Genic
-724
NZ_LR595897.1
2148554
2148567
AATTCG
13
+
2
TTCGAA
UKMR15_RS26245
2147706
2148785
-
Genic
-848
NZ_LR595897.1
2148712
2148724
AGCGCG
12
+
2
CGAGCG
UKMR15_RS26245
2147706
2148785
-
Genic
-1006
NZ_LR595897.1
2148836
2148848
CCGCG
12
-
2
CGCGG
UKMR15_RS26245
2147706
2148785
-
Intergenic
-1130
NZ_LR595897.1
2149293
2149305
AACACG
12
-
2
CGTGTT
UKMR15_RS26250
2148919
2149542
-
Genic
-374
NZ_LR595897.1
2149643
2149661
CCGGCG
18
+
3
GCGCCG
UKMR15_RS26250
2148919
2149542
-
Intergenic
-724
NZ_LR595897.1
2150174
2150186
ACG
12
+
4
ACG
UKMR15_RS26255
2149778
2150266
+
Genic
-396
NZ_LR595897.1
2150238
2150251
ATGCGC
13
+
2
GCATGC
UKMR15_RS26255
2149778
2150266
+
Genic
-460
NZ_LR595897.1
2151637
2151650
CCGCG
13
-
2
GCGCG
UKMR15_RS26265
2151689
2152336
+
Intergenic
39
NZ_LR595897.1
2152572
2152584
CCG
12
-
4
GGC
UKMR15_RS26265
2151689
2152336
+
Intergenic
-883
NZ_LR595897.1
2154302
2154317
CCG
15
-
5
GCG
UKMR15_RS26270
2152892
2154337
-
Genic
-1410
NZ_LR595897.1
2155400
2155412
CCGCG
12
+
2
CGCGC
UKMR15_RS26285
2155449
2155700
-
Intergenic
37
NZ_LR595897.1
2156336
2156354
CCGCG
18
+
3
CGCGC
UKMR15_RS26290
2155728
2156711
-
Genic
-608
NZ_LR595897.1
2156453
2156465
ACCGGC
12
+
2
CGGCAC
UKMR15_RS26290
2155728
2156711
-
Genic
-725