Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9851 to 9875 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2589071
2589083
CCGCG
12
-
2
CGCGG
UKMR15_RS28095
2587467
2590715
+
Genic
-1604
NZ_LR595897.1
2589704
2589719
ATCGGC
15
+
2
ATCGGC
UKMR15_RS28095
2587467
2590715
+
Genic
-2237
NZ_LR595897.1
2590088
2590100
ACCGCT
12
+
2
CGCTAC
UKMR15_RS28095
2587467
2590715
+
Genic
-2621
NZ_LR595897.1
2590147
2590160
AGC
13
-
4
GCT
UKMR15_RS28095
2587467
2590715
+
Genic
-2680
NZ_LR595897.1
2590909
2590921
ATCGC
12
+
2
CGCAT
UKMR15_RS28100
2590718
2591842
+
Genic
-191
NZ_LR595897.1
2591079
2591091
ACGCG
12
+
2
CGACG
UKMR15_RS28100
2590718
2591842
+
Genic
-361
NZ_LR595897.1
2591314
2591327
AGCGCG
13
+
2
CGCGAG
UKMR15_RS28100
2590718
2591842
+
Genic
-596
NZ_LR595897.1
2591590
2591602
ACCAGC
12
-
2
GTGCTG
UKMR15_RS28100
2590718
2591842
+
Genic
-872
NZ_LR595897.1
2593003
2593016
ATCGC
13
-
2
GCGAT
UKMR15_RS28105
2591992
2593827
+
Genic
-1011
NZ_LR595897.1
2593598
2593612
ACGGGC
14
-
2
GCCCGT
UKMR15_RS28105
2591992
2593827
+
Genic
-1606
NZ_LR595897.1
2593747
2593759
CCGCG
12
-
2
CGGCG
UKMR15_RS28105
2591992
2593827
+
Genic
-1755
NZ_LR595897.1
2593839
2593859
AGCGCC
20
-
3
CGCTGG
UKMR15_RS28105
2591992
2593827
+
Intergenic
-1847
NZ_LR595897.1
2593854
2593892
ATCGCC
38
-
6
TGGCGA
UKMR15_RS28105
2591992
2593827
+
Intergenic
-1862
NZ_LR595897.1
2594512
2594524
AGCGCG
12
-
2
CGCGCT
UKMR15_RS28110
2594183
2595748
-
Genic
-329
NZ_LR595897.1
2594519
2594533
AGCGC
14
-
2
GCGCT
UKMR15_RS28110
2594183
2595748
-
Genic
-336
NZ_LR595897.1
2595384
2595398
ACGCCG
14
-
2
CGTCGG
UKMR15_RS28110
2594183
2595748
-
Genic
-1201
NZ_LR595897.1
2596829
2596841
AGATCG
12
+
2
GATCGA
UKMR15_RS28120
2596856
2597371
-
Intergenic
15
NZ_LR595897.1
2599009
2599024
CCGCG
15
+
3
GCCGC
UKMR15_RS28130
2598696
2599544
-
Genic
-313
NZ_LR595897.1
2599316
2599331
CCGCG
15
-
3
GCGCG
UKMR15_RS28130
2598696
2599544
-
Genic
-620
NZ_LR595897.1
2599556
2599570
AAGCCG
14
-
2
GCTTCG
UKMR15_RS28135
2599541
2601541
-
Genic
-15
NZ_LR595897.1
2599621
2599633
ACCGC
12
-
2
CGGTG
UKMR15_RS28135
2599541
2601541
-
Genic
-80
NZ_LR595897.1
2600727
2600739
ACG
12
+
4
CGA
UKMR15_RS28135
2599541
2601541
-
Genic
-1186
NZ_LR595897.1
2601106
2601118
CCGCG
12
-
2
CGGCG
UKMR15_RS28135
2599541
2601541
-
Genic
-1565
NZ_LR595897.1
2601441
2601453
AGCGCG
12
+
2
GCGCGA
UKMR15_RS28135
2599541
2601541
-
Genic
-1900
NZ_LR595897.1
2601507
2601519
CCG
12
-
4
CGG
UKMR15_RS28135
2599541
2601541
-
Genic
-1966