Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9876 to 9900 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2601527
2601539
ACGCCG
12
-
2
GGCGTC
UKMR15_RS28135
2599541
2601541
-
Genic
-1986
NZ_LR595897.1
2601615
2601627
AGCTCG
12
+
2
TCGAGC
UKMR15_RS28140
2601525
2602274
-
Genic
-90
NZ_LR595897.1
2602005
2602017
AGCGCG
12
-
2
CGCTCG
UKMR15_RS28140
2601525
2602274
-
Genic
-480
NZ_LR595897.1
2602311
2602324
AGC
13
+
4
CAG
UKMR15_RS28145
2602288
2602536
-
Genic
-23
NZ_LR595897.1
2602885
2602899
AGCGCG
14
+
2
CGAGCG
UKMR15_RS28150
2602533
2603234
-
Genic
-352
NZ_LR595897.1
2603119
2603134
AGCGCG
15
+
2
CGAGCG
UKMR15_RS28150
2602533
2603234
-
Genic
-586
NZ_LR595897.1
2603347
2603359
ACCGCC
12
+
2
CACCGC
UKMR15_RS28155
2603231
2603539
-
Genic
-116
NZ_LR595897.1
2603665
2603679
AGCGCG
14
+
2
CGAGCG
UKMR15_RS28160
2603532
2604023
-
Genic
-133
NZ_LR595897.1
2603935
2603952
CCGGCG
17
+
2
CGGCGC
UKMR15_RS28160
2603532
2604023
-
Genic
-403
NZ_LR595897.1
2605767
2605779
CCGCG
12
+
2
GCGCC
UKMR15_RS28170
2604465
2606051
-
Genic
-1302
NZ_LR595897.1
2605795
2605809
AGCGCG
14
+
2
CGAGCG
UKMR15_RS28170
2604465
2606051
-
Genic
-1330
NZ_LR595897.1
2606706
2606718
CCCGCG
12
+
2
CCGCGC
UKMR15_RS28175
2606412
2608205
+
Genic
-294
NZ_LR595897.1
2607291
2607303
ACCGCG
12
+
2
GCGACC
UKMR15_RS28175
2606412
2608205
+
Genic
-879
NZ_LR595897.1
2608131
2608143
CCG
12
+
4
CGC
UKMR15_RS28175
2606412
2608205
+
Genic
-1719
NZ_LR595897.1
2608448
2608460
CCCCGG
12
-
2
GCCGGG
UKMR15_RS28180
2608216
2609619
+
Genic
-232
NZ_LR595897.1
2611426
2611438
ACGCCG
12
-
2
TCGGCG
UKMR15_RS28190
2611522
2613048
-
Intergenic
84
NZ_LR595897.1
2611605
2611617
ACGCCG
12
+
2
CGACGC
UKMR15_RS28190
2611522
2613048
-
Genic
-83
NZ_LR595897.1
2614291
2614304
CCGCG
13
+
2
GCGCC
UKMR15_RS28200
2613982
2614317
+
Genic
-309
NZ_LR595897.1
2616726
2616738
AAACGG
12
-
2
TTTCCG
UKMR15_RS28215
2616324
2616722
-
Intergenic
-402
NZ_LR595897.1
2617077
2617089
ACGCCG
12
+
2
ACGCCG
UKMR15_RS28220
2617015
2617194
+
Genic
-62
NZ_LR595897.1
2618474
2618486
ATCGCG
12
+
2
CGATCG
UKMR15_RS28235
2618290
2619564
-
Genic
-184
NZ_LR595897.1
2619270
2619282
AACGCG
12
+
2
CGCGAA
UKMR15_RS28235
2618290
2619564
-
Genic
-980
NZ_LR595897.1
2619640
2619652
CG
12
+
6
GC
UKMR15_RS28240
2619701
2620147
+
Intergenic
49
NZ_LR595897.1
2619805
2619884
ATCGCC
79
-
13
GGCGAT
UKMR15_RS28240
2619701
2620147
+
Genic
-104
NZ_LR595897.1
2620226
2620238
CCCCG
12
+
2
CCCCG
UKMR15_RS28245
2620100
2621299
-
Genic
-126