Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9926 to 9950 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2641512
2641524
AAGCTC
12
+
2
AAGCTC
UKMR15_RS28320
2641057
2643420
+
Genic
-455
NZ_LR595897.1
2642584
2642596
AGCGCG
12
-
2
CGCTCG
UKMR15_RS28320
2641057
2643420
+
Genic
-1527
NZ_LR595897.1
2642961
2642973
AAGGGC
12
+
2
GGCAAG
UKMR15_RS28320
2641057
2643420
+
Genic
-1904
NZ_LR595897.1
2643998
2644013
CCG
15
-
5
GCG
UKMR15_RS28325
2643917
2645083
+
Genic
-81
NZ_LR595897.1
2644091
2644109
CCCGCG
18
+
3
CGCCCG
UKMR15_RS28325
2643917
2645083
+
Genic
-174
NZ_LR595897.1
2645526
2645538
AACACG
12
+
2
ACGAAC
UKMR15_RS28330
2645359
2645709
+
Genic
-167
NZ_LR595897.1
2646087
2646099
AGCCGC
12
-
2
TGCGGC
UKMR15_RS28335
2645992
2646267
+
Genic
-95
NZ_LR595897.1
2646433
2646445
AGCGCG
12
-
2
CGCTCG
dmeF
2646280
2647548
+
Genic
-153
NZ_LR595897.1
2646744
2646758
ACGGCC
14
+
2
CACGGC
dmeF
2646280
2647548
+
Genic
-464
NZ_LR595897.1
2647224
2647236
ACATCC
12
-
2
TGGATG
dmeF
2646280
2647548
+
Genic
-944
NZ_LR595897.1
2647746
2647758
CCGGCG
12
+
2
GCGCCG
dmeF
2646280
2647548
+
Intergenic
-1466
NZ_LR595897.1
2648410
2648424
ACAGCG
14
+
2
CGACAG
UKMR15_RS28345
2648328
2649380
+
Genic
-82
NZ_LR595897.1
2648906
2648918
AATCCG
12
-
2
GATTCG
UKMR15_RS28345
2648328
2649380
+
Genic
-578
NZ_LR595897.1
2649602
2649614
CG
12
+
6
GC
UKMR15_RS28350
2649452
2652358
+
Genic
-150
NZ_LR595897.1
2650465
2650477
ATCCG
12
+
2
TCCGA
UKMR15_RS28350
2649452
2652358
+
Genic
-1013
NZ_LR595897.1
2650771
2650783
AAGTCG
12
-
2
TTCGAC
UKMR15_RS28350
2649452
2652358
+
Genic
-1319
NZ_LR595897.1
2651062
2651074
AGATCG
12
-
2
CTCGAT
UKMR15_RS28350
2649452
2652358
+
Genic
-1610
NZ_LR595897.1
2652258
2652270
CCG
12
+
4
GCC
UKMR15_RS28350
2649452
2652358
+
Genic
-2806
NZ_LR595897.1
2654030
2654042
CCCG
12
+
3
CGCC
UKMR15_RS28365
2653938
2655560
+
Genic
-92
NZ_LR595897.1
2654188
2654201
ACGCGC
13
+
2
CGCGCA
UKMR15_RS28365
2653938
2655560
+
Genic
-250
NZ_LR595897.1
2654416
2654428
CCCGCG
12
-
2
GGCGCG
UKMR15_RS28365
2653938
2655560
+
Genic
-478
NZ_LR595897.1
2654449
2654463
ACCGGC
14
+
2
CGGCAC
UKMR15_RS28365
2653938
2655560
+
Genic
-511
NZ_LR595897.1
2655526
2655539
AGCGGC
13
-
2
GCCGCT
UKMR15_RS28365
2653938
2655560
+
Genic
-1588
NZ_LR595897.1
2657042
2657054
AACGCG
12
+
2
AACGCG
UKMR15_RS28375
2656596
2657750
+
Genic
-446
NZ_LR595897.1
2657233
2657245
AAGACG
12
+
2
CGAAGA
UKMR15_RS28375
2656596
2657750
+
Genic
-637