Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10001 to 10025 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2697111
2697126
AACGCG
15
+
2
CGCGAA
UKMR15_RS28540
2695753
2697315
-
Genic
-1358
NZ_LR595897.1
2697446
2697459
CCGCG
13
+
2
CGCGC
UKMR15_RS28540
2695753
2697315
-
Intergenic
-1693
NZ_LR595897.1
2697795
2697810
ACGGCG
15
-
2
CGCCGT
UKMR15_RS28540
2695753
2697315
-
Intergenic
-2042
NZ_LR595897.1
2697817
2697830
CCGCG
13
-
2
GCGCG
UKMR15_RS28540
2695753
2697315
-
Intergenic
-2064
NZ_LR595897.1
2697998
2698011
CCGCG
13
+
2
CGCCG
wecB
2698578
2699792
+
Intergenic
567
NZ_LR595897.1
2698845
2698857
ACGAGC
12
-
2
TCGTGC
wecB
2698578
2699792
+
Genic
-267
NZ_LR595897.1
2698865
2698877
ACG
12
+
4
ACG
wecB
2698578
2699792
+
Genic
-287
NZ_LR595897.1
2699131
2699143
ACGCCG
12
+
2
CGACGC
wecB
2698578
2699792
+
Genic
-553
NZ_LR595897.1
2699599
2699613
ACG
14
+
4
CGA
wecB
2698578
2699792
+
Genic
-1021
NZ_LR595897.1
2699660
2699672
AGCG
12
+
3
GCGA
wecB
2698578
2699792
+
Genic
-1082
NZ_LR595897.1
2699752
2699766
AGCGCG
14
-
2
CGCGCT
wecB
2698578
2699792
+
Genic
-1174
NZ_LR595897.1
2700405
2700419
AACGGC
14
+
2
CGGCAA
UKMR15_RS28550
2700216
2700292
-
Intergenic
-189
NZ_LR595897.1
2700869
2700883
CCCGCG
14
-
2
GGCGCG
UKMR15_RS28555
2700618
2700848
-
Intergenic
-251
NZ_LR595897.1
2701195
2701207
CCCGCG
12
+
2
CGCCCG
UKMR15_RS28560
2701062
2701940
-
Genic
-133
NZ_LR595897.1
2701479
2701495
CCGCG
16
-
3
GCGCG
UKMR15_RS28560
2701062
2701940
-
Genic
-417
NZ_LR595897.1
2701864
2701876
CCGG
12
+
3
GCCG
UKMR15_RS28560
2701062
2701940
-
Genic
-802
NZ_LR595897.1
2702351
2702363
AGGATC
12
-
2
CTGATC
UKMR15_RS28565
2702079
2702834
+
Genic
-272
NZ_LR595897.1
2703030
2703042
AGATCG
12
+
2
GATCGA
UKMR15_RS28570
2702978
2703310
+
Genic
-52
NZ_LR595897.1
2703225
2703237
AGCGCG
12
+
2
GCGCGA
UKMR15_RS28570
2702978
2703310
+
Genic
-247
NZ_LR595897.1
2703295
2703308
AAATCG
13
-
2
TTCGAT
UKMR15_RS28570
2702978
2703310
+
Genic
-317
NZ_LR595897.1
2703349
2703363
CCG
14
-
4
CGG
UKMR15_RS28570
2702978
2703310
+
Intergenic
-371
NZ_LR595897.1
2703429
2703441
ACGCGC
12
-
2
GCGCGT
UKMR15_RS28575
2703548
2703976
+
Intergenic
107
NZ_LR595897.1
2704063
2704075
CCGCG
12
+
2
CGCCG
UKMR15_RS28575
2703548
2703976
+
Intergenic
-515
NZ_LR595897.1
2704239
2704255
CG
16
+
8
CG
UKMR15_RS28580
2704195
2705616
-
Genic
-44
NZ_LR595897.1
2705634
2705647
CCGGCG
13
+
2
GCCGGC
UKMR15_RS28580
2704195
2705616
-
Intergenic
-1439