Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10051 to 10075 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2723366
2723378
CCGCG
12
-
2
GCGCG
UKMR15_RS28650
2721837
2723843
+
Genic
-1529
NZ_LR595897.1
2724232
2724244
AAGGTG
12
+
2
TGAAGG
UKMR15_RS28655
2723878
2724762
+
Genic
-354
NZ_LR595897.1
2724745
2724757
ACCGC
12
+
2
CCGCA
UKMR15_RS28655
2723878
2724762
+
Genic
-867
NZ_LR595897.1
2725088
2725100
CCGCG
12
+
2
GCCGC
UKMR15_RS28660
2725125
2726786
+
Intergenic
25
NZ_LR595897.1
2726041
2726053
CCG
12
+
4
CGC
UKMR15_RS28660
2725125
2726786
+
Genic
-916
NZ_LR595897.1
2726224
2726237
AGATCG
13
+
2
CGAGAT
UKMR15_RS28660
2725125
2726786
+
Genic
-1099
NZ_LR595897.1
2726822
2726834
CCGCG
12
-
2
CGGCG
UKMR15_RS28660
2725125
2726786
+
Intergenic
-1697
NZ_LR595897.1
2726867
2726879
CCGCG
12
-
2
CGGCG
UKMR15_RS28660
2725125
2726786
+
Intergenic
-1742
NZ_LR595897.1
2726977
2726989
CCGCG
12
-
2
CGGCG
UKMR15_RS28660
2725125
2726786
+
Intergenic
-1852
NZ_LR595897.1
2729558
2729574
ACGGCG
16
+
2
GCGACG
UKMR15_RS28670
2729123
2730157
+
Genic
-435
NZ_LR595897.1
2730014
2730026
ACGCGG
12
-
2
CCGCGT
UKMR15_RS28670
2729123
2730157
+
Genic
-891
NZ_LR595897.1
2730587
2730600
AGCGCG
13
-
2
CTCGCG
UKMR15_RS28680
2730480
2731415
+
Genic
-107
NZ_LR595897.1
2730730
2730742
AGCCGC
12
-
2
CGGCTG
UKMR15_RS28680
2730480
2731415
+
Genic
-250
NZ_LR595897.1
2731505
2731517
CCCGCG
12
+
2
CGCCCG
UKMR15_RS28685
2731412
2732452
+
Genic
-93
NZ_LR595897.1
2732451
2732463
CCCGCG
12
+
2
GCCCGC
UKMR15_RS28685
2731412
2732452
+
Genic
-1039
NZ_LR595897.1
2733709
2733721
CCCGG
12
+
2
GCCCG
UKMR15_RS28695
2733515
2735368
+
Genic
-194
NZ_LR595897.1
2733966
2733978
AGATCG
12
+
2
GATCGA
UKMR15_RS28695
2733515
2735368
+
Genic
-451
NZ_LR595897.1
2734371
2734383
ACGCCG
12
+
2
CGCCGA
UKMR15_RS28695
2733515
2735368
+
Genic
-856
NZ_LR595897.1
2736128
2736140
AAGCCG
12
-
2
GGCTTC
UKMR15_RS28705
2735808
2736779
+
Genic
-320
NZ_LR595897.1
2736401
2736414
ACGCGC
13
-
2
TGCGCG
UKMR15_RS28705
2735808
2736779
+
Genic
-593
NZ_LR595897.1
2738822
2738834
CCCCCG
12
+
2
CGCCCC
UKMR15_RS28720
2738081
2738809
+
Intergenic
-741
NZ_LR595897.1
2742919
2742931
ACGGCG
12
-
2
CGTCGC
UKMR15_RS28745
2741757
2743517
-
Genic
-1162
NZ_LR595897.1
2743170
2743182
AAGGCG
12
+
2
GCGAAG
UKMR15_RS28745
2741757
2743517
-
Genic
-1413
NZ_LR595897.1
2745543
2745555
AACCCG
12
+
2
ACCCGA
UKMR15_RS28750
2743960
2753385
-
Genic
-1583
NZ_LR595897.1
2748674
2748686
ACGCTC
12
+
2
TCACGC
UKMR15_RS28750
2743960
2753385
-
Genic
-4714