Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10101 to 10125 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2789118
2789131
CCGCG
13
-
2
GCGGC
tssG
2787938
2789383
-
Genic
-1180
NZ_LR595897.1
2791568
2791580
ACGCGC
12
-
2
TGCGCG
tssE
2791256
2791804
-
Genic
-312
NZ_LR595897.1
2791706
2791718
AGCGCG
12
-
2
CGCTCG
tssE
2791256
2791804
-
Genic
-450
NZ_LR595897.1
2792179
2792191
AGCGGC
12
-
2
GCCGCT
UKMR15_RS28900
2791823
2792314
-
Genic
-356
NZ_LR595897.1
2795614
2795626
CCGGCG
12
+
2
CCGGCG
tssA
2794516
2795595
-
Intergenic
-1098
NZ_LR595897.1
2796063
2796075
CCGCG
12
-
2
GCGGC
UKMR15_RS28920
2795648
2798233
-
Genic
-415
NZ_LR595897.1
2796155
2796168
CCCGCG
13
-
2
GCGGGC
UKMR15_RS28920
2795648
2798233
-
Genic
-507
NZ_LR595897.1
2796222
2796234
CCCGCG
12
-
2
CGGGCG
UKMR15_RS28920
2795648
2798233
-
Genic
-574
NZ_LR595897.1
2796383
2796395
CG
12
+
6
CG
UKMR15_RS28920
2795648
2798233
-
Genic
-735
NZ_LR595897.1
2796741
2796761
ACTGCG
20
+
3
GCGACT
UKMR15_RS28920
2795648
2798233
-
Genic
-1093
NZ_LR595897.1
2796860
2796872
CCGCG
12
+
2
GCCGC
UKMR15_RS28920
2795648
2798233
-
Genic
-1212
NZ_LR595897.1
2797012
2797024
CCG
12
+
4
CGC
UKMR15_RS28920
2795648
2798233
-
Genic
-1364
NZ_LR595897.1
2797144
2797156
ATCCGC
12
+
2
CGCATC
UKMR15_RS28920
2795648
2798233
-
Genic
-1496
NZ_LR595897.1
2797634
2797646
CCGCG
12
+
2
CGCGC
UKMR15_RS28920
2795648
2798233
-
Genic
-1986
NZ_LR595897.1
2798097
2798109
ACGCCG
12
+
2
CGCCGA
UKMR15_RS28920
2795648
2798233
-
Genic
-2449
NZ_LR595897.1
2798147
2798159
AGCGGC
12
+
2
AGCGGC
UKMR15_RS28920
2795648
2798233
-
Genic
-2499
NZ_LR595897.1
2798175
2798187
CCG
12
+
4
CGC
UKMR15_RS28920
2795648
2798233
-
Genic
-2527
NZ_LR595897.1
2799165
2799180
CCCGCG
15
+
2
CGCGCC
tssM
2799399
2803028
-
Intergenic
219
NZ_LR595897.1
2799326
2799338
CCCGCG
12
+
2
CGCCCG
tssM
2799399
2803028
-
Intergenic
61
NZ_LR595897.1
2799715
2799727
ACGTCG
12
+
2
CGTCGA
tssM
2799399
2803028
-
Genic
-316
NZ_LR595897.1
2800008
2800023
CCGCG
15
+
3
CGCGC
tssM
2799399
2803028
-
Genic
-609
NZ_LR595897.1
2800222
2800234
CCGCG
12
+
2
GCGCC
tssM
2799399
2803028
-
Genic
-823
NZ_LR595897.1
2800531
2800543
AGCGCG
12
+
2
GCGCGA
tssM
2799399
2803028
-
Genic
-1132
NZ_LR595897.1
2801097
2801111
AGCGC
14
-
2
GCGCT
tssM
2799399
2803028
-
Genic
-1698
NZ_LR595897.1
2801848
2801862
ATCGGC
14
+
2
GCATCG
tssM
2799399
2803028
-
Genic
-2449