Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10126 to 10150 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2802725
2802737
AGGCGC
12
-
2
CTGCGC
tssM
2799399
2803028
-
Genic
-3326
NZ_LR595897.1
2802909
2802921
AACGCG
12
+
2
GCGAAC
tssM
2799399
2803028
-
Genic
-3510
NZ_LR595897.1
2803379
2803391
AGCCGG
12
+
2
GAGCCG
UKMR15_RS28940
2803031
2804347
-
Genic
-348
NZ_LR595897.1
2803631
2803644
AGCGCG
13
+
2
AGCGCG
UKMR15_RS28940
2803031
2804347
-
Genic
-600
NZ_LR595897.1
2806583
2806596
CCGCG
13
+
2
CGCGC
tssJ
2805763
2806281
-
Intergenic
-820
NZ_LR595897.1
2807736
2807748
CCG
12
-
4
GCG
tagH
2807377
2808813
+
Genic
-359
NZ_LR595897.1
2807865
2807877
CCGCG
12
+
2
CGCGC
tagH
2807377
2808813
+
Genic
-488
NZ_LR595897.1
2807903
2807916
CCGCG
13
+
2
CGCCG
tagH
2807377
2808813
+
Genic
-526
NZ_LR595897.1
2807998
2808012
AAGGCG
14
+
2
GCGAAG
tagH
2807377
2808813
+
Genic
-621
NZ_LR595897.1
2808470
2808483
AGCGGC
13
-
2
GCTGCC
tagH
2807377
2808813
+
Genic
-1093
NZ_LR595897.1
2808611
2808623
AGCGCG
12
+
2
GCGCGA
tagH
2807377
2808813
+
Genic
-1234
NZ_LR595897.1
2810651
2810668
ACGCCG
17
-
2
CGGCGT
UKMR15_RS28965
2808856
2810754
-
Genic
-1795
NZ_LR595897.1
2810874
2810886
ACCCC
12
-
2
GGGGT
UKMR15_RS28965
2808856
2810754
-
Intergenic
-2018
NZ_LR595897.1
2811165
2811178
AAATAT
13
-
2
TTATAT
UKMR15_RS28975
2811222
2812466
+
Intergenic
44
NZ_LR595897.1
2813430
2813442
ATCGCG
12
+
2
CGATCG
UKMR15_RS28990
2813142
2813318
+
Intergenic
-288
NZ_LR595897.1
2815550
2815562
ACGCG
12
+
2
CGCGA
UKMR15_RS29000
2814656
2815570
+
Genic
-894
NZ_LR595897.1
2815615
2815629
CCGCG
14
+
2
GCGCC
UKMR15_RS29000
2814656
2815570
+
Intergenic
-959
NZ_LR595897.1
2815636
2815649
ACAGAG
13
-
2
GTCTCT
UKMR15_RS29000
2814656
2815570
+
Intergenic
-980
NZ_LR595897.1
2815644
2815658
AGAGGC
14
-
2
CTCTGC
UKMR15_RS29005
2815726
2817063
-
Intergenic
68
NZ_LR595897.1
2815654
2815685
AAGGCG
31
-
5
GCCTTC
UKMR15_RS29005
2815726
2817063
-
Intergenic
41
NZ_LR595897.1
2815680
2815696
AAGACG
16
-
2
CTTCGT
UKMR15_RS29005
2815726
2817063
-
Intergenic
30
NZ_LR595897.1
2815728
2815740
CCCGCG
12
+
2
CGCGCC
UKMR15_RS29005
2815726
2817063
-
Genic
-2
NZ_LR595897.1
2816620
2816633
CCGCG
13
+
2
CGCGC
UKMR15_RS29005
2815726
2817063
-
Genic
-894
NZ_LR595897.1
2816695
2816707
AGCGCG
12
+
2
GCGAGC
UKMR15_RS29005
2815726
2817063
-
Genic
-969
NZ_LR595897.1
2817037
2817049
AAAGCG
12
+
2
AGCGAA
UKMR15_RS29005
2815726
2817063
-
Genic
-1311