Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10076 to 10100 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2751273
2751285
ACCGGC
12
-
2
GCCGGT
UKMR15_RS28750
2743960
2753385
-
Genic
-7313
NZ_LR595897.1
2752480
2752492
ACGAG
12
+
2
GACGA
UKMR15_RS28750
2743960
2753385
-
Genic
-8520
NZ_LR595897.1
2759039
2759051
AAACGT
12
+
2
GTAAAC
UKMR15_RS28765
2754590
2759248
-
Genic
-4449
NZ_LR595897.1
2761016
2761028
ACGCGC
12
-
2
CGTGCG
tssI
2760519
2762723
-
Genic
-497
NZ_LR595897.1
2762036
2762049
ACGACT
13
-
2
GTAGTC
tssI
2760519
2762723
-
Genic
-1517
NZ_LR595897.1
2764907
2764920
AACACG
13
+
2
GAACAC
tnpB
2764698
2765045
-
Genic
-209
NZ_LR595897.1
2767477
2767490
AACCCG
13
-
2
GTTCGG
UKMR15_RS28810
2765882
2767915
-
Genic
-1595
NZ_LR595897.1
2772315
2772327
AGGCGC
12
-
2
GCGCCT
UKMR15_RS28830
2772170
2773411
-
Genic
-145
NZ_LR595897.1
2775198
2775210
ATGCCC
12
+
2
CCATGC
UKMR15_RS28840
2774734
2775372
-
Genic
-464
NZ_LR595897.1
2776868
2776880
AACGCG
12
-
2
GCGTTC
UKMR15_RS28845
2777145
2778299
-
Intergenic
265
NZ_LR595897.1
2777959
2777974
ACATCG
15
+
2
CATCGA
UKMR15_RS28845
2777145
2778299
-
Genic
-814
NZ_LR595897.1
2782482
2782494
AACAGC
12
-
2
TGTTGC
UKMR15_RS28870
2782332
2783042
-
Genic
-150
NZ_LR595897.1
2783064
2783076
AAACTG
12
-
2
TTCAGT
tssI
2783058
2785262
-
Genic
-6
NZ_LR595897.1
2783699
2783711
AATGCG
12
+
2
CGAATG
tssI
2783058
2785262
-
Genic
-641
NZ_LR595897.1
2784180
2784192
CCGCGG
12
+
2
CGCGGC
tssI
2783058
2785262
-
Genic
-1122
NZ_LR595897.1
2784575
2784588
ACGACT
13
-
2
GTAGTC
tssI
2783058
2785262
-
Genic
-1517
NZ_LR595897.1
2784972
2784984
ACAGCC
12
+
2
AGCCAC
tssI
2783058
2785262
-
Genic
-1914
NZ_LR595897.1
2785971
2785983
ACGATC
12
-
2
TGATCG
tssH
2785259
2787925
-
Genic
-712
NZ_LR595897.1
2786012
2786026
AGCGCG
14
+
2
GCGAGC
tssH
2785259
2787925
-
Genic
-753
NZ_LR595897.1
2786099
2786111
CG
12
+
6
CG
tssH
2785259
2787925
-
Genic
-840
NZ_LR595897.1
2786745
2786759
ACGAGC
14
+
2
CGAGCA
tssH
2785259
2787925
-
Genic
-1486
NZ_LR595897.1
2788047
2788061
CCCCGG
14
-
2
CGGGGC
tssG
2787938
2789383
-
Genic
-109
NZ_LR595897.1
2788107
2788119
AGCGCG
12
+
2
CGAGCG
tssG
2787938
2789383
-
Genic
-169
NZ_LR595897.1
2788137
2788149
AGCTCG
12
+
2
CGAGCT
tssG
2787938
2789383
-
Genic
-199
NZ_LR595897.1
2788942
2788956
CCCGCG
14
-
2
GCGCGG
tssG
2787938
2789383
-
Genic
-1004