Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10151 to 10175 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2817192
2817204
AGCGC
12
-
2
GCGCT
UKMR15_RS29010
2817160
2818101
+
Genic
-32
NZ_LR595897.1
2818067
2818079
CCGCG
12
-
2
CGCGG
UKMR15_RS29010
2817160
2818101
+
Genic
-907
NZ_LR595897.1
2818717
2818729
AAGGGC
12
+
2
GGCAAG
UKMR15_RS29015
2818332
2818637
-
Intergenic
-385
NZ_LR595897.1
2818937
2818950
ACTGGC
13
-
2
CAGTGC
UKMR15_RS29020
2819110
2819784
-
Intergenic
160
NZ_LR595897.1
2821594
2821606
AGGCCG
12
-
2
CTCGGC
UKMR15_RS29030
2820602
2821843
+
Genic
-992
NZ_LR595897.1
2821751
2821763
AAGCCG
12
-
2
GCTTCG
UKMR15_RS29030
2820602
2821843
+
Genic
-1149
NZ_LR595897.1
2823279
2823291
ACGC
12
-
3
CGTG
UKMR15_RS29040
2823430
2823846
-
Intergenic
139
NZ_LR595897.1
2825115
2825127
CCGCGG
12
+
2
GCCGCG
UKMR15_RS29045
2824372
2825706
+
Genic
-743
NZ_LR595897.1
2825353
2825365
ACGAGC
12
-
2
TCGTGC
UKMR15_RS29045
2824372
2825706
+
Genic
-981
NZ_LR595897.1
2828950
2828963
AAGGGC
13
-
2
GCCCTT
UKMR15_RS29060
2828624
2829472
-
Genic
-326
NZ_LR595897.1
2830426
2830438
AGCCG
12
-
2
CGGCT
UKMR15_RS29070
2829983
2830807
+
Genic
-443
NZ_LR595897.1
2831414
2831426
ACGCG
12
+
2
CGACG
iaaH
2831107
2832510
+
Genic
-307
NZ_LR595897.1
2834883
2834895
ACGTGC
12
+
2
CGTGCA
UKMR15_RS29085
2833757
2836120
-
Genic
-1126
NZ_LR595897.1
2835479
2835491
AGCTCG
12
+
2
TCGAGC
UKMR15_RS29085
2833757
2836120
-
Genic
-1722
NZ_LR595897.1
2836281
2836295
CCG
14
+
4
CGC
UKMR15_RS29085
2833757
2836120
-
Intergenic
-2524
NZ_LR595897.1
2837711
2837726
CCGCGG
15
+
2
CGCGGC
UKMR15_RS29095
2837662
2837952
-
Genic
-49
NZ_LR595897.1
2837774
2837786
AAGCCG
12
-
2
GCTTCG
UKMR15_RS29095
2837662
2837952
-
Genic
-112
NZ_LR595897.1
2838926
2838947
ATCGGC
21
-
3
GCCGAT
UKMR15_RS29105
2838410
2838910
-
Intergenic
-516
NZ_LR595897.1
2838948
2838964
ATCGGC
16
-
2
ATGCCG
UKMR15_RS29105
2838410
2838910
-
Intergenic
-538
NZ_LR595897.1
2839178
2839195
AATGCG
17
+
2
ATGCGA
UKMR15_RS29105
2838410
2838910
-
Intergenic
-768
NZ_LR595897.1
2839322
2839335
ATCGGC
13
-
2
CCGATG
UKMR15_RS29105
2838410
2838910
-
Intergenic
-912
NZ_LR595897.1
2839496
2839509
CCCCG
13
+
2
CCCGC
UKMR15_RS29105
2838410
2838910
-
Intergenic
-1086
NZ_LR595897.1
2841628
2841640
CCCGCG
12
+
2
CCGCGC
UKMR15_RS29115
2841097
2842500
+
Genic
-531
NZ_LR595897.1
2841664
2841676
ACG
12
-
4
TCG
UKMR15_RS29115
2841097
2842500
+
Genic
-567
NZ_LR595897.1
2841806
2841818
ACGAGC
12
-
2
GCTCGT
UKMR15_RS29115
2841097
2842500
+
Genic
-709