Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10201 to 10225 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2866009
2866021
AGCGCG
12
+
2
AGCGCG
UKMR15_RS29225
2865934
2867061
-
Genic
-75
NZ_LR595897.1
2866793
2866807
CCGCG
14
-
2
GCGCG
UKMR15_RS29225
2865934
2867061
-
Genic
-859
NZ_LR595897.1
2866887
2866899
AACACG
12
+
2
GAACAC
UKMR15_RS29225
2865934
2867061
-
Genic
-953
NZ_LR595897.1
2867557
2867571
ACGAGC
14
+
2
CGAGCA
rarD
2867460
2868353
-
Genic
-97
NZ_LR595897.1
2867657
2867671
AGCGCG
14
+
2
CGCGAG
rarD
2867460
2868353
-
Genic
-197
NZ_LR595897.1
2867714
2867726
CCGG
12
+
3
CGGC
rarD
2867460
2868353
-
Genic
-254
NZ_LR595897.1
2868337
2868349
CCCGCG
12
+
2
CGCCCG
rarD
2867460
2868353
-
Genic
-877
NZ_LR595897.1
2869357
2869369
ACGCCG
12
+
2
GCCGAC
UKMR15_RS29240
2868807
2869814
+
Genic
-550
NZ_LR595897.1
2870875
2870891
AAGCGC
16
+
2
GCGCAA
UKMR15_RS29245
2870069
2871637
+
Genic
-806
NZ_LR595897.1
2871356
2871368
AGCGCG
12
-
2
CGCTCG
UKMR15_RS29245
2870069
2871637
+
Genic
-1287
NZ_LR595897.1
2871751
2871770
ACAGGG
19
+
3
GGGACA
UKMR15_RS29250
2871871
2873061
-
Intergenic
101
NZ_LR595897.1
2872753
2872765
CCGCGG
12
+
2
GCCGCG
UKMR15_RS29250
2871871
2873061
-
Genic
-882
NZ_LR595897.1
2872921
2872936
CCGCGG
15
+
2
GCGGCC
UKMR15_RS29250
2871871
2873061
-
Genic
-1050
NZ_LR595897.1
2872930
2872942
CCGCG
12
+
2
GCCGC
UKMR15_RS29250
2871871
2873061
-
Genic
-1059
NZ_LR595897.1
2873799
2873811
AGGATC
12
-
2
CTGATC
ispH
2873455
2874396
+
Genic
-344
NZ_LR595897.1
2873898
2873910
ACGCTG
12
+
2
ACGCTG
ispH
2873455
2874396
+
Genic
-443
NZ_LR595897.1
2874119
2874132
AACTCG
13
+
2
CTCGAA
ispH
2873455
2874396
+
Genic
-664
NZ_LR595897.1
2874874
2874887
AAGCG
13
+
2
GCGAA
hpnH
2874409
2875569
+
Genic
-465
NZ_LR595897.1
2875520
2875533
AAGGGC
13
+
2
GGGCAA
hpnH
2874409
2875569
+
Genic
-1111
NZ_LR595897.1
2875585
2875597
AGCGCG
12
-
2
CGCGCT
hpnH
2874409
2875569
+
Intergenic
-1176
NZ_LR595897.1
2875880
2875894
CCG
14
+
4
CGC
UKMR15_RS29265
2875912
2876265
+
Intergenic
18
NZ_LR595897.1
2876387
2876399
AAGTG
12
-
2
ACTTC
UKMR15_RS29265
2875912
2876265
+
Intergenic
-475
NZ_LR595897.1
2877978
2877990
CCGGCG
12
+
2
GCGCCG
UKMR15_RS29270
2876824
2878182
+
Genic
-1154
NZ_LR595897.1
2878190
2878202
CCG
12
-
4
GCG
UKMR15_RS29270
2876824
2878182
+
Intergenic
-1366
NZ_LR595897.1
2878615
2878627
ACGCGC
12
+
2
GCACGC
UKMR15_RS29275
2879026
2879451
+
Intergenic
399