Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10251 to 10275 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2892453
2892465
ACGCCG
12
+
2
CGCCGA
UKMR15_RS29340
2892116
2893324
-
Genic
-337
NZ_LR595897.1
2892659
2892671
CCG
12
-
4
GCG
UKMR15_RS29340
2892116
2893324
-
Genic
-543
NZ_LR595897.1
2893016
2893029
ACGAGC
13
+
2
ACGAGC
UKMR15_RS29340
2892116
2893324
-
Genic
-900
NZ_LR595897.1
2895493
2895505
ACGCG
12
-
2
CGCGT
UKMR15_RS29360
2895068
2895607
+
Genic
-425
NZ_LR595897.1
2895557
2895572
ATCGCG
15
+
2
TCGCGA
UKMR15_RS29360
2895068
2895607
+
Genic
-489
NZ_LR595897.1
2895750
2895762
CCGCG
12
+
2
GCCGC
UKMR15_RS29360
2895068
2895607
+
Intergenic
-682
NZ_LR595897.1
2895989
2896003
AGCGCG
14
-
2
CGCGCT
UKMR15_RS29360
2895068
2895607
+
Intergenic
-921
NZ_LR595897.1
2896182
2896194
CCGG
12
+
3
GCCG
UKMR15_RS29360
2895068
2895607
+
Intergenic
-1114
NZ_LR595897.1
2896704
2896716
AGCCG
12
-
2
CGGCT
cpaB
2897074
2897919
+
Intergenic
358
NZ_LR595897.1
2897101
2897115
ATCGCC
14
+
2
TCGCCA
cpaB
2897074
2897919
+
Genic
-27
NZ_LR595897.1
2897999
2898011
CCGCG
12
+
2
CGCGC
cpaB
2897074
2897919
+
Intergenic
-925
NZ_LR595897.1
2898085
2898099
CCGCG
14
-
2
GCGCG
cpaB
2897074
2897919
+
Intergenic
-1011
NZ_LR595897.1
2898242
2898256
CCCGCG
14
+
2
GCGCCC
cpaB
2897074
2897919
+
Intergenic
-1168
NZ_LR595897.1
2898580
2898592
AGCGCG
12
+
2
GCGCGA
cpaB
2897074
2897919
+
Intergenic
-1506
NZ_LR595897.1
2898669
2898681
ATCGCG
12
+
2
TCGCGA
cpaB
2897074
2897919
+
Intergenic
-1595
NZ_LR595897.1
2898720
2898732
CCG
12
-
4
GCG
cpaB
2897074
2897919
+
Intergenic
-1646
NZ_LR595897.1
2899656
2899668
CCG
12
+
4
CCG
UKMR15_RS29380
2900126
2900431
+
Intergenic
458
NZ_LR595897.1
2899669
2899681
AGGCGC
12
-
2
GCCTGC
UKMR15_RS29380
2900126
2900431
+
Intergenic
445
NZ_LR595897.1
2899680
2899693
CCCGCG
13
+
2
CCGCGC
UKMR15_RS29380
2900126
2900431
+
Intergenic
433
NZ_LR595897.1
2899822
2899834
CCCGCG
12
+
2
CGCGCC
UKMR15_RS29380
2900126
2900431
+
Intergenic
292
NZ_LR595897.1
2899840
2899852
CCCG
12
+
3
CGCC
UKMR15_RS29380
2900126
2900431
+
Intergenic
274
NZ_LR595897.1
2900913
2900925
ACCGTG
12
+
2
CGTGAC
UKMR15_RS29385
2900456
2901712
+
Genic
-457
NZ_LR595897.1
2901477
2901491
AGCGCG
14
-
2
GCTCGC
UKMR15_RS29385
2900456
2901712
+
Genic
-1021
NZ_LR595897.1
2901948
2901960
AGGCGC
12
+
2
GCGCAG
UKMR15_RS29390
2901772
2902278
+
Genic
-176
NZ_LR595897.1
2902462
2902474
ACGCCG
12
+
2
CGACGC
UKMR15_RS29395
2902275
2902736
+
Genic
-187