Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10301 to 10325 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2916836
2916848
ATCGCC
12
+
2
CATCGC
UKMR15_RS29455
2915976
2917283
-
Genic
-860
NZ_LR595897.1
2917430
2917442
AACCTC
12
+
2
TCAACC
UKMR15_RS29460
2917412
2918326
+
Genic
-18
NZ_LR595897.1
2918195
2918207
ATGCGC
12
+
2
TGCGCA
UKMR15_RS29460
2917412
2918326
+
Genic
-783
NZ_LR595897.1
2918959
2918971
AGGCGC
12
+
2
GCGCAG
UKMR15_RS29465
2918618
2920744
-
Genic
-341
NZ_LR595897.1
2919151
2919165
CCGCG
14
-
2
GCGCG
UKMR15_RS29465
2918618
2920744
-
Genic
-533
NZ_LR595897.1
2919905
2919917
ACCGCC
12
-
2
GCGGTG
UKMR15_RS29465
2918618
2920744
-
Genic
-1287
NZ_LR595897.1
2920193
2920205
ACGCG
12
-
2
CGCGT
UKMR15_RS29465
2918618
2920744
-
Genic
-1575
NZ_LR595897.1
2921605
2921617
ACGCCG
12
-
2
TCGGCG
UKMR15_RS29475
2921377
2921670
+
Genic
-228
NZ_LR595897.1
2921755
2921767
CCCGCG
12
+
2
CGCGCC
UKMR15_RS29480
2921678
2922055
+
Genic
-77
NZ_LR595897.1
2922138
2922152
AGCATC
14
-
2
TGCTGA
UKMR15_RS29485
2922102
2923421
+
Genic
-36
NZ_LR595897.1
2922253
2922265
ACATCG
12
+
2
CATCGA
UKMR15_RS29485
2922102
2923421
+
Genic
-151
NZ_LR595897.1
2922330
2922343
AGCCGC
13
-
2
GGCTGC
UKMR15_RS29485
2922102
2923421
+
Genic
-228
NZ_LR595897.1
2922433
2922447
AGCGCG
14
-
2
CGCGCT
UKMR15_RS29485
2922102
2923421
+
Genic
-331
NZ_LR595897.1
2924002
2924014
AACGGC
12
+
2
GCAACG
ligD
2924031
2927531
-
Intergenic
17
NZ_LR595897.1
2924528
2924540
ACCCGG
12
-
2
CGGGTC
ligD
2924031
2927531
-
Genic
-497
NZ_LR595897.1
2924536
2924548
ACCTCG
12
-
2
GGTCGA
ligD
2924031
2927531
-
Genic
-505
NZ_LR595897.1
2925040
2925057
AAGTCG
17
+
2
TCGAAG
ligD
2924031
2927531
-
Genic
-1009
NZ_LR595897.1
2925603
2925615
CCGCG
12
+
2
CGCGC
ligD
2924031
2927531
-
Genic
-1572
NZ_LR595897.1
2925705
2925717
CCGCG
12
+
2
GCCGC
ligD
2924031
2927531
-
Genic
-1674
NZ_LR595897.1
2926091
2926103
AACAGG
12
+
2
GAACAG
ligD
2924031
2927531
-
Genic
-2060
NZ_LR595897.1
2926301
2926313
CCGCG
12
+
2
CGCCG
ligD
2924031
2927531
-
Genic
-2270
NZ_LR595897.1
2926813
2926825
CCCGCG
12
+
2
CGCGCC
ligD
2924031
2927531
-
Genic
-2782
NZ_LR595897.1
2926903
2926915
ACGGCG
12
-
2
CGTCGC
ligD
2924031
2927531
-
Genic
-2872
NZ_LR595897.1
2927956
2927968
CCGGCG
12
+
2
GCGCCG
UKMR15_RS29495
2927601
2928689
-
Genic
-355
NZ_LR595897.1
2928485
2928497
ACGAGT
12
-
2
CTCGTA
UKMR15_RS29495
2927601
2928689
-
Genic
-884