Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10351 to 10375 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2942199
2942214
CCGCG
15
+
3
CGCGC
UKMR15_RS29570
2942428
2942727
-
Intergenic
214
NZ_LR595897.1
2943076
2943088
AAGGAC
12
+
2
AAGGAC
UKMR15_RS29575
2943020
2943268
+
Genic
-56
NZ_LR595897.1
2943349
2943362
ACGCGC
13
+
2
CGCGCA
UKMR15_RS29575
2943020
2943268
+
Intergenic
-329
NZ_LR595897.1
2944056
2944068
AGCGCG
12
-
2
CGCTCG
UKMR15_RS29580
2943984
2944628
-
Genic
-72
NZ_LR595897.1
2944103
2944116
AGCGCC
13
+
2
CCAGCG
UKMR15_RS29580
2943984
2944628
-
Genic
-119
NZ_LR595897.1
2944288
2944300
ACGCCG
12
-
2
CGTCGG
UKMR15_RS29580
2943984
2944628
-
Genic
-304
NZ_LR595897.1
2944950
2944962
ACCGCC
12
+
2
CACCGC
UKMR15_RS29585
2945216
2945647
+
Intergenic
254
NZ_LR595897.1
2945010
2945024
CCGCG
14
+
2
CCGCG
UKMR15_RS29585
2945216
2945647
+
Intergenic
192
NZ_LR595897.1
2945684
2945696
CCCG
12
+
3
CCGC
UKMR15_RS29585
2945216
2945647
+
Intergenic
-468
NZ_LR595897.1
2947078
2947090
CCCCG
12
-
2
GGGCG
UKMR15_RS29600
2947059
2947415
+
Genic
-19
NZ_LR595897.1
2947090
2947102
AGCGCG
12
-
2
CGCGCT
UKMR15_RS29600
2947059
2947415
+
Genic
-31
NZ_LR595897.1
2947477
2947490
ACG
13
+
4
GAC
UKMR15_RS29605
2947427
2948083
+
Genic
-50
NZ_LR595897.1
2948243
2948255
CCGCG
12
+
2
CGCGC
UKMR15_RS29610
2948162
2949607
+
Genic
-81
NZ_LR595897.1
2948817
2948830
ACGTCG
13
+
2
CGTCGA
UKMR15_RS29610
2948162
2949607
+
Genic
-655
NZ_LR595897.1
2948954
2948966
ACCTCG
12
-
2
TCGAGG
UKMR15_RS29610
2948162
2949607
+
Genic
-792
NZ_LR595897.1
2949565
2949578
ACCGCG
13
-
2
GCGGTC
UKMR15_RS29610
2948162
2949607
+
Genic
-1403
NZ_LR595897.1
2950213
2950227
AGCGCG
14
+
2
GCGCGA
UKMR15_RS29615
2949717
2950892
-
Genic
-496
NZ_LR595897.1
2951338
2951350
CCGCG
12
+
2
CGCGC
UKMR15_RS29620
2951305
2951913
-
Genic
-33
NZ_LR595897.1
2952037
2952049
CCGCG
12
+
2
CGCGC
UKMR15_RS29625
2952034
2952639
-
Genic
-3
NZ_LR595897.1
2953356
2953370
ACCGCG
14
+
2
CGACCG
UKMR15_RS29630
2952677
2953534
-
Genic
-679
NZ_LR595897.1
2953471
2953483
AGCGCG
12
-
2
CTCGCG
UKMR15_RS29630
2952677
2953534
-
Genic
-794
NZ_LR595897.1
2954259
2954271
AGGCGG
12
-
2
CCGCCT
UKMR15_RS29635
2953745
2954311
-
Genic
-514
NZ_LR595897.1
2954327
2954341
CCGCG
14
-
2
GCGCG
UKMR15_RS29635
2953745
2954311
-
Intergenic
-582
NZ_LR595897.1
2954525
2954538
CCGCG
13
+
2
CGCGC
UKMR15_RS29640
2954555
2954860
-
Intergenic
17
NZ_LR595897.1
2954805
2954818
CG
13
+
6
GC
UKMR15_RS29640
2954555
2954860
-
Genic
-250