Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10326 to 10350 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2928727
2928739
CCCGCG
12
+
2
CCGCGC
UKMR15_RS29500
2928771
2929274
-
Intergenic
32
NZ_LR595897.1
2928751
2928763
CCGCG
12
+
2
GCGCC
UKMR15_RS29500
2928771
2929274
-
Intergenic
8
NZ_LR595897.1
2929164
2929177
AGCGCG
13
+
2
AGCGCG
UKMR15_RS29500
2928771
2929274
-
Genic
-393
NZ_LR595897.1
2929543
2929558
ACGGCG
15
-
2
CCGTCG
katE
2929297
2931423
-
Genic
-246
NZ_LR595897.1
2929655
2929667
ACCGGC
12
+
2
GCACCG
katE
2929297
2931423
-
Genic
-358
NZ_LR595897.1
2929831
2929843
CCG
12
-
4
GGC
katE
2929297
2931423
-
Genic
-534
NZ_LR595897.1
2930046
2930058
ACGCGC
12
+
2
GCGCAC
katE
2929297
2931423
-
Genic
-749
NZ_LR595897.1
2931517
2931529
CCGCG
12
-
2
CGCGG
UKMR15_RS29510
2931559
2931945
-
Intergenic
30
NZ_LR595897.1
2931990
2932003
CCGCG
13
+
2
CGCGC
UKMR15_RS29515
2932025
2932186
-
Intergenic
22
NZ_LR595897.1
2932008
2932020
ACGCGC
12
-
2
TGCGCG
UKMR15_RS29515
2932025
2932186
-
Intergenic
5
NZ_LR595897.1
2932432
2932444
AACGCG
12
-
2
TTCGCG
UKMR15_RS29520
2932231
2932419
-
Intergenic
-201
NZ_LR595897.1
2932591
2932603
AGCGCG
12
+
2
GCGCGA
UKMR15_RS29525
2932485
2933960
-
Genic
-106
NZ_LR595897.1
2933182
2933194
ACACGC
12
-
2
GCGTGT
UKMR15_RS29525
2932485
2933960
-
Genic
-697
NZ_LR595897.1
2934199
2934211
ACGCG
12
-
2
GTCGC
UKMR15_RS29525
2932485
2933960
-
Intergenic
-1714
NZ_LR595897.1
2934595
2934609
CCGCG
14
+
2
CGCGC
UKMR15_RS29530
2934637
2935395
+
Intergenic
28
NZ_LR595897.1
2935798
2935810
CCCGCG
12
-
2
GGCGCG
UKMR15_RS29535
2935454
2936350
+
Genic
-344
NZ_LR595897.1
2937944
2937958
ACGTCG
14
+
2
CGTCGA
UKMR15_RS29545
2937694
2938251
-
Genic
-250
NZ_LR595897.1
2938027
2938039
ACGGCG
12
-
2
TCGCCG
UKMR15_RS29545
2937694
2938251
-
Genic
-333
NZ_LR595897.1
2938452
2938464
AGGCCG
12
-
2
GGCCTC
UKMR15_RS29545
2937694
2938251
-
Intergenic
-758
NZ_LR595897.1
2940311
2940323
AGCGC
12
-
2
GCTGC
UKMR15_RS29560
2940270
2940581
-
Genic
-41
NZ_LR595897.1
2940419
2940431
ACCGTC
12
+
2
CGTCAC
UKMR15_RS29560
2940270
2940581
-
Genic
-149
NZ_LR595897.1
2941776
2941805
ACTCGG
29
-
4
GTCCGA
UKMR15_RS29565
2940926
2941195
-
Intergenic
-850
NZ_LR595897.1
2941803
2941829
AACGCG
26
-
4
CGCGTT
UKMR15_RS29570
2942428
2942727
-
Intergenic
599
NZ_LR595897.1
2942020
2942033
CCGCGG
13
+
2
CGCGGC
UKMR15_RS29570
2942428
2942727
-
Intergenic
395
NZ_LR595897.1
2942152
2942166
ACCCGC
14
+
2
ACCCGC
UKMR15_RS29570
2942428
2942727
-
Intergenic
262