Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10376 to 10400 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2955081
2955093
AGCGCG
12
+
2
AGCGCG
UKMR15_RS29645
2955021
2956052
-
Genic
-60
NZ_LR595897.1
2955856
2955869
ACCGCG
13
+
2
CCGCGA
UKMR15_RS29645
2955021
2956052
-
Genic
-835
NZ_LR595897.1
2955933
2955945
ACGAGC
12
+
2
ACGAGC
UKMR15_RS29645
2955021
2956052
-
Genic
-912
NZ_LR595897.1
2956195
2956210
CCGCG
15
+
3
CCGCG
UKMR15_RS29650
2956080
2956592
-
Genic
-115
NZ_LR595897.1
2956977
2956992
ACGTCG
15
+
2
CGTCGA
UKMR15_RS29655
2956859
2958190
+
Genic
-118
NZ_LR595897.1
2957484
2957496
CG
12
+
6
CG
UKMR15_RS29655
2956859
2958190
+
Genic
-625
NZ_LR595897.1
2958091
2958106
CCGCG
15
-
3
GCGCG
UKMR15_RS29655
2956859
2958190
+
Genic
-1232
NZ_LR595897.1
2959517
2959530
ACGCGC
13
-
2
GCGCGT
UKMR15_RS29665
2959362
2961677
-
Genic
-155
NZ_LR595897.1
2959530
2959547
ATCCGC
17
+
2
TCCGCA
UKMR15_RS29665
2959362
2961677
-
Genic
-168
NZ_LR595897.1
2959580
2959593
ACGGCG
13
-
2
GCCGTC
UKMR15_RS29665
2959362
2961677
-
Genic
-218
NZ_LR595897.1
2960154
2960166
ACGGCG
12
-
2
TCGCCG
UKMR15_RS29665
2959362
2961677
-
Genic
-792
NZ_LR595897.1
2960934
2960946
AGCGCG
12
-
2
CGCTCG
UKMR15_RS29665
2959362
2961677
-
Genic
-1572
NZ_LR595897.1
2961709
2961721
CG
12
+
6
GC
UKMR15_RS29665
2959362
2961677
-
Intergenic
-2347
NZ_LR595897.1
2962630
2962642
ACG
12
-
4
TCG
UKMR15_RS29675
2962483
2963430
+
Genic
-147
NZ_LR595897.1
2963001
2963013
CCGCG
12
-
2
CGGCG
UKMR15_RS29675
2962483
2963430
+
Genic
-518
NZ_LR595897.1
2963247
2963262
CCGCG
15
+
3
CGCGC
UKMR15_RS29675
2962483
2963430
+
Genic
-764
NZ_LR595897.1
2963432
2963444
ATCGGC
12
+
2
GCATCG
UKMR15_RS29675
2962483
2963430
+
Intergenic
-949
NZ_LR595897.1
2964000
2964013
ACGTCG
13
+
2
ACGTCG
UKMR15_RS29680
2963454
2964824
-
Genic
-546
NZ_LR595897.1
2964643
2964655
AACGGC
12
-
2
TGCCGT
UKMR15_RS29680
2963454
2964824
-
Genic
-1189
NZ_LR595897.1
2966392
2966405
CCGCG
13
-
2
GCGGC
UKMR15_RS29690
2966415
2967365
-
Intergenic
10
NZ_LR595897.1
2966836
2966849
AGCCG
13
+
2
CCGAG
UKMR15_RS29690
2966415
2967365
-
Genic
-421
NZ_LR595897.1
2968027
2968039
CCGCG
12
-
2
CGCGG
UKMR15_RS29695
2967355
2968470
-
Genic
-672
NZ_LR595897.1
2968640
2968655
CCGCGG
15
+
2
CGCGGC
UKMR15_RS29700
2968467
2969468
-
Genic
-173
NZ_LR595897.1
2968663
2968678
AGCGCG
15
+
2
CGAGCG
UKMR15_RS29700
2968467
2969468
-
Genic
-196
NZ_LR595897.1
2969077
2969089
CCGCGG
12
+
2
CGGCCG
UKMR15_RS29700
2968467
2969468
-
Genic
-610