Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10426 to 10450 repeats of 10659
Go To:
<<
<
416
417
418
419
420
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2988555
2988568
ATCGCG
13
+
2
CGCGAT
UKMR15_RS29780
2987875
2989128
-
Genic
-680
NZ_LR595897.1
2988785
2988797
ACGAGC
12
+
2
CGAGCA
UKMR15_RS29780
2987875
2989128
-
Genic
-910
NZ_LR595897.1
2989156
2989168
AGCGCG
12
+
2
GCGCGA
UKMR15_RS29780
2987875
2989128
-
Intergenic
-1281
NZ_LR595897.1
2989995
2990011
CCCGCG
16
-
2
GGCGCG
UKMR15_RS29785
2989491
2990177
-
Genic
-504
NZ_LR595897.1
2990030
2990042
ATCGGC
12
-
2
CGATGC
UKMR15_RS29785
2989491
2990177
-
Genic
-539
NZ_LR595897.1
2990101
2990113
CCCGCG
12
-
2
CGGGCG
UKMR15_RS29785
2989491
2990177
-
Genic
-610
NZ_LR595897.1
2990255
2990267
CCG
12
-
4
GCG
UKMR15_RS29790
2990177
2990677
-
Genic
-78
NZ_LR595897.1
2990381
2990393
CCGCG
12
+
2
GCCGC
UKMR15_RS29790
2990177
2990677
-
Genic
-204
NZ_LR595897.1
2990617
2990629
AAACAG
12
-
2
GTTTCT
UKMR15_RS29790
2990177
2990677
-
Genic
-440
NZ_LR595897.1
2991025
2991037
CCG
12
+
4
CGC
UKMR15_RS29795
2990871
2992028
-
Genic
-154
NZ_LR595897.1
2993302
2993315
ACGCGC
13
-
2
TGCGCG
lpdA
2992681
2994081
-
Genic
-621
NZ_LR595897.1
2993375
2993387
ACGCGC
12
+
2
GCACGC
lpdA
2992681
2994081
-
Genic
-694
NZ_LR595897.1
2993531
2993543
ACG
12
+
4
CGA
lpdA
2992681
2994081
-
Genic
-850
NZ_LR595897.1
2993691
2993704
ACGTCG
13
+
2
GTCGAC
lpdA
2992681
2994081
-
Genic
-1010
NZ_LR595897.1
2994327
2994343
ACGATC
16
-
2
TCGTGA
UKMR15_RS29805
2994086
2995543
-
Genic
-241
NZ_LR595897.1
2995095
2995107
ACGAGC
12
-
2
CGTGCT
UKMR15_RS29805
2994086
2995543
-
Genic
-1009
NZ_LR595897.1
2995250
2995262
CCG
12
-
4
GCG
UKMR15_RS29805
2994086
2995543
-
Genic
-1164
NZ_LR595897.1
2995302
2995314
AAGTCG
12
-
2
CTTCGA
UKMR15_RS29805
2994086
2995543
-
Genic
-1216
NZ_LR595897.1
2996785
2996797
ATCGGC
12
-
2
GCCGAT
UKMR15_RS29815
2996594
2997826
-
Genic
-191
NZ_LR595897.1
2997456
2997468
AGCGCG
12
+
2
CGAGCG
UKMR15_RS29815
2996594
2997826
-
Genic
-862
NZ_LR595897.1
2998195
2998208
CCCGCG
13
+
2
CCCGCG
UKMR15_RS29815
2996594
2997826
-
Intergenic
-1601
NZ_LR595897.1
2998537
2998549
CCCCCG
12
+
2
CCCGCC
UKMR15_RS29820
2999079
2999519
+
Intergenic
530
NZ_LR595897.1
2998948
2998961
ACGATG
13
-
2
GTCATC
UKMR15_RS29820
2999079
2999519
+
Intergenic
118
NZ_LR595897.1
2999822
2999834
CCGCG
12
-
2
GCGCG
UKMR15_RS29825
2999854
3000969
-
Intergenic
20
NZ_LR595897.1
3003613
3003625
ACGCCG
12
+
2
CGACGC
UKMR15_RS29840
3002868
3004766
+
Genic
-745