Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10476 to 10500 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
3015159
3015171
CCGCG
12
-
2
GCGGC
UKMR15_RS29870
3014925
3015956
+
Genic
-234
NZ_LR595897.1
3015230
3015242
ACGGCG
12
-
2
CCGTCG
UKMR15_RS29870
3014925
3015956
+
Genic
-305
NZ_LR595897.1
3015817
3015829
AGATCG
12
+
2
GATCGA
UKMR15_RS29870
3014925
3015956
+
Genic
-892
NZ_LR595897.1
3015957
3015971
AACGCG
14
+
2
CGAACG
UKMR15_RS29875
3015953
3017785
+
Genic
-4
NZ_LR595897.1
3015991
3016004
CCGCG
13
-
2
GCGCG
UKMR15_RS29875
3015953
3017785
+
Genic
-38
NZ_LR595897.1
3015998
3016010
CCG
12
-
4
GCG
UKMR15_RS29875
3015953
3017785
+
Genic
-45
NZ_LR595897.1
3016454
3016466
ACGCTG
12
+
2
CGCTGA
UKMR15_RS29875
3015953
3017785
+
Genic
-501
NZ_LR595897.1
3016577
3016589
AGCGCG
12
-
2
CGCTCG
UKMR15_RS29875
3015953
3017785
+
Genic
-624
NZ_LR595897.1
3016853
3016866
ATCGCG
13
+
2
TCGCGA
UKMR15_RS29875
3015953
3017785
+
Genic
-900
NZ_LR595897.1
3017842
3017854
ACGATC
12
+
2
ACGATC
UKMR15_RS29875
3015953
3017785
+
Intergenic
-1889
NZ_LR595897.1
3018134
3018148
AACGGC
14
-
2
CCGTTG
UKMR15_RS29880
3018245
3018694
-
Intergenic
97
NZ_LR595897.1
3018207
3018235
ACGAG
28
+
5
CGAGA
UKMR15_RS29880
3018245
3018694
-
Intergenic
10
NZ_LR595897.1
3018555
3018569
ACGCGC
14
-
2
GCGCGT
UKMR15_RS29880
3018245
3018694
-
Genic
-310
NZ_LR595897.1
3019378
3019391
ACCGC
13
+
2
CCGCA
UKMR15_RS29885
3019137
3019790
+
Genic
-241
NZ_LR595897.1
3019840
3019852
CCGCG
12
-
2
CGGCG
UKMR15_RS29890
3019858
3020292
-
Intergenic
6
NZ_LR595897.1
3021072
3021084
AGCGCG
12
-
2
TCGCGC
UKMR15_RS29895
3020678
3021808
-
Genic
-394
NZ_LR595897.1
3021216
3021228
AGCGCG
12
+
2
CGAGCG
UKMR15_RS29895
3020678
3021808
-
Genic
-538
NZ_LR595897.1
3021775
3021787
CCG
12
+
4
CGC
UKMR15_RS29895
3020678
3021808
-
Genic
-1097
NZ_LR595897.1
3022333
3022346
AGCGCG
13
+
2
CGAGCG
UKMR15_RS29900
3021885
3023690
-
Genic
-448
NZ_LR595897.1
3022526
3022539
AATGCC
13
-
2
GGCATT
UKMR15_RS29900
3021885
3023690
-
Genic
-641
NZ_LR595897.1
3022648
3022660
AGCGCG
12
+
2
GCGCGA
UKMR15_RS29900
3021885
3023690
-
Genic
-763
NZ_LR595897.1
3022710
3022722
CG
12
+
6
CG
UKMR15_RS29900
3021885
3023690
-
Genic
-825
NZ_LR595897.1
3023019
3023031
CCGCG
12
+
2
CGCGC
UKMR15_RS29900
3021885
3023690
-
Genic
-1134
NZ_LR595897.1
3023482
3023494
ACGCCG
12
+
2
CGCCGA
UKMR15_RS29900
3021885
3023690
-
Genic
-1597
NZ_LR595897.1
3024249
3024264
CCGCG
15
-
3
GCGCG
UKMR15_RS29900
3021885
3023690
-
Intergenic
-2364