Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10526 to 10550 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
3037170
3037182
AGGCCG
12
+
2
GGCCGA
UKMR15_RS29945
3034403
3037324
+
Genic
-2767
NZ_LR595897.1
3037627
3037639
ACGAGC
12
-
2
GCTCGT
UKMR15_RS29950
3037338
3038135
+
Genic
-289
NZ_LR595897.1
3038020
3038033
ACGCGC
13
-
2
CGCGTG
UKMR15_RS29950
3037338
3038135
+
Genic
-682
NZ_LR595897.1
3038137
3038149
CCGGCG
12
+
2
GGCGCC
UKMR15_RS29950
3037338
3038135
+
Intergenic
-799
NZ_LR595897.1
3038526
3038538
AGCGCG
12
-
2
CGCTCG
UKMR15_RS29955
3038193
3039143
+
Genic
-333
NZ_LR595897.1
3038731
3038747
ACGCGC
16
-
2
CGCGTG
UKMR15_RS29955
3038193
3039143
+
Genic
-538
NZ_LR595897.1
3038760
3038773
CCGCG
13
-
2
GCGGC
UKMR15_RS29955
3038193
3039143
+
Genic
-567
NZ_LR595897.1
3038771
3038784
ACGCG
13
-
2
CGCGT
UKMR15_RS29955
3038193
3039143
+
Genic
-578
NZ_LR595897.1
3040532
3040544
ATCGCG
12
+
2
GCGATC
UKMR15_RS29965
3040215
3041105
+
Genic
-317
NZ_LR595897.1
3041714
3041726
CCCGCG
12
+
2
CGCCCG
UKMR15_RS29970
3041570
3042961
+
Genic
-144
NZ_LR595897.1
3041939
3041952
CG
13
+
6
CG
UKMR15_RS29970
3041570
3042961
+
Genic
-369
NZ_LR595897.1
3041975
3041987
AGCGCG
12
-
2
TCGCGC
UKMR15_RS29970
3041570
3042961
+
Genic
-405
NZ_LR595897.1
3042134
3042149
CCGCG
15
-
3
GCGCG
UKMR15_RS29970
3041570
3042961
+
Genic
-564
NZ_LR595897.1
3043098
3043110
AACGC
12
+
2
GCAAC
UKMR15_RS29975
3043144
3045678
-
Intergenic
34
NZ_LR595897.1
3043174
3043190
ACGCCG
16
-
2
GGCGTC
UKMR15_RS29975
3043144
3045678
-
Genic
-30
NZ_LR595897.1
3043283
3043295
CCGGCG
12
+
2
GCGCCG
UKMR15_RS29975
3043144
3045678
-
Genic
-139
NZ_LR595897.1
3043872
3043884
CCG
12
+
4
CGC
UKMR15_RS29975
3043144
3045678
-
Genic
-728
NZ_LR595897.1
3044042
3044054
AGCGCG
12
+
2
CGAGCG
UKMR15_RS29975
3043144
3045678
-
Genic
-898
NZ_LR595897.1
3045545
3045557
ACGGCG
12
+
2
CGGCGA
UKMR15_RS29975
3043144
3045678
-
Genic
-2401
NZ_LR595897.1
3045563
3045575
CCGCG
12
+
2
CGCCG
UKMR15_RS29975
3043144
3045678
-
Genic
-2419
NZ_LR595897.1
3045597
3045610
ACGGCG
13
+
2
GACGGC
UKMR15_RS29975
3043144
3045678
-
Genic
-2453
NZ_LR595897.1
3045768
3045811
AACCCG
43
-
7
GGGTTC
UKMR15_RS29980
3045691
3045960
+
Genic
-77
NZ_LR595897.1
3045807
3045847
AAGTCG
40
-
6
TTCGAC
UKMR15_RS29980
3045691
3045960
+
Genic
-116
NZ_LR595897.1
3045846
3045867
ATGCCC
21
-
3
GGCATG
UKMR15_RS29980
3045691
3045960
+
Genic
-155
NZ_LR595897.1
3046760
3046772
AACGCG
12
-
2
TTCGCG
UKMR15_RS29985
3046379
3047947
-
Genic
-381