Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10551 to 10575 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
3047182
3047194
CCCGCG
12
-
2
GGCGCG
UKMR15_RS29985
3046379
3047947
-
Genic
-803
NZ_LR595897.1
3047271
3047283
CCG
12
+
4
CCG
UKMR15_RS29985
3046379
3047947
-
Genic
-892
NZ_LR595897.1
3047382
3047394
ACCGGC
12
+
2
CCGGCA
UKMR15_RS29985
3046379
3047947
-
Genic
-1003
NZ_LR595897.1
3047890
3047902
CCGCGG
12
+
2
CGCGGC
UKMR15_RS29985
3046379
3047947
-
Genic
-1511
NZ_LR595897.1
3048137
3048155
CCGCG
18
-
3
GCGCG
UKMR15_RS29985
3046379
3047947
-
Intergenic
-1758
NZ_LR595897.1
3048498
3048510
CCCCG
12
+
2
CCGCC
UKMR15_RS29990
3048377
3048622
-
Genic
-121
NZ_LR595897.1
3049032
3049044
AGCCG
12
+
2
GCCGA
UKMR15_RS29995
3048651
3049823
-
Genic
-381
NZ_LR595897.1
3049749
3049761
ACGCGC
12
-
2
TGCGCG
UKMR15_RS29995
3048651
3049823
-
Genic
-1098
NZ_LR595897.1
3050889
3050901
CCCGCG
12
-
2
GGCGCG
UKMR15_RS30000
3050148
3051734
-
Genic
-741
NZ_LR595897.1
3051142
3051154
CCG
12
+
4
CCG
UKMR15_RS30000
3050148
3051734
-
Genic
-994
NZ_LR595897.1
3051352
3051364
AGCGCG
12
+
2
CGAGCG
UKMR15_RS30000
3050148
3051734
-
Genic
-1204
NZ_LR595897.1
3052337
3052353
ATCCCG
16
+
2
CCCGAT
UKMR15_RS30005
3051882
3052508
+
Genic
-455
NZ_LR595897.1
3053065
3053078
CCGCG
13
+
2
GCGCC
UKMR15_RS30010
3052700
3053275
-
Genic
-365
NZ_LR595897.1
3053217
3053229
AGCGCG
12
-
2
TCGCGC
UKMR15_RS30010
3052700
3053275
-
Genic
-517
NZ_LR595897.1
3053302
3053314
AGCGGC
12
+
2
AGCGGC
UKMR15_RS30015
3053272
3053829
-
Genic
-30
NZ_LR595897.1
3053797
3053810
CCG
13
-
4
GGC
UKMR15_RS30015
3053272
3053829
-
Genic
-525
NZ_LR595897.1
3054143
3054155
ACGCCG
12
-
2
TCGGCG
UKMR15_RS30020
3053834
3055195
-
Genic
-309
NZ_LR595897.1
3054790
3054802
ACCCGG
12
-
2
GTCCGG
UKMR15_RS30020
3053834
3055195
-
Genic
-956
NZ_LR595897.1
3055210
3055222
ACGTCG
12
+
2
ACGTCG
UKMR15_RS30025
3055195
3056628
-
Genic
-15
NZ_LR595897.1
3055858
3055870
AGCTCG
12
+
2
TCGAGC
UKMR15_RS30025
3055195
3056628
-
Genic
-663
NZ_LR595897.1
3055989
3056002
CCCGCG
13
+
2
CGCGCC
UKMR15_RS30025
3055195
3056628
-
Genic
-794
NZ_LR595897.1
3056445
3056460
CCCGCG
15
+
2
GCCCGC
UKMR15_RS30025
3055195
3056628
-
Genic
-1250
NZ_LR595897.1
3056647
3056659
CCGCG
12
+
2
GCGCC
UKMR15_RS30030
3056621
3057037
-
Genic
-26
NZ_LR595897.1
3058589
3058601
AGCAGG
12
+
2
GCAGGA
UKMR15_RS30035
3057844
3059244
+
Genic
-745
NZ_LR595897.1
3059381
3059395
AGCGCG
14
-
2
GCGCTC
UKMR15_RS30040
3059241
3059888
+
Genic
-140