Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10576 to 10600 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
3060305
3060318
CCCGCG
13
+
2
CGCCCG
UKMR15_RS30045
3060082
3060678
-
Genic
-223
NZ_LR595897.1
3061307
3061320
AGCGCG
13
+
2
GAGCGC
UKMR15_RS30050
3060969
3061709
-
Genic
-338
NZ_LR595897.1
3062642
3062654
ACGCTC
12
+
2
GCTCAC
UKMR15_RS30055
3061743
3064361
-
Genic
-899
NZ_LR595897.1
3062794
3062808
ACG
14
-
4
CGT
UKMR15_RS30055
3061743
3064361
-
Genic
-1051
NZ_LR595897.1
3064045
3064057
ACGATC
12
+
2
TCACGA
UKMR15_RS30055
3061743
3064361
-
Genic
-2302
NZ_LR595897.1
3065572
3065584
CCGCGG
12
+
2
GCCGCG
UKMR15_RS30060
3064501
3065604
-
Genic
-1071
NZ_LR595897.1
3066067
3066079
AGCGCG
12
+
2
GCGAGC
UKMR15_RS30065
3065698
3066462
-
Genic
-369
NZ_LR595897.1
3066224
3066236
AACACG
12
+
2
CGAACA
UKMR15_RS30065
3065698
3066462
-
Genic
-526
NZ_LR595897.1
3066260
3066272
CCGCG
12
+
2
GCCGC
UKMR15_RS30065
3065698
3066462
-
Genic
-562
NZ_LR595897.1
3066327
3066339
CCCGCG
12
-
2
GGCGCG
UKMR15_RS30065
3065698
3066462
-
Genic
-629
NZ_LR595897.1
3066734
3066746
AGGCCG
12
+
2
GCCGAG
UKMR15_RS30070
3066525
3066923
-
Genic
-209
NZ_LR595897.1
3067249
3067261
ACGCGT
12
+
2
ACGCGT
UKMR15_RS30075
3066963
3068261
-
Genic
-286
NZ_LR595897.1
3068217
3068229
CCGCGG
12
+
2
GCCGCG
UKMR15_RS30075
3066963
3068261
-
Genic
-1254
NZ_LR595897.1
3069297
3069314
AGCGCG
17
+
2
CGCGAG
UKMR15_RS30085
3069097
3070524
-
Genic
-200
NZ_LR595897.1
3069492
3069504
AACACG
12
+
2
CACGAA
UKMR15_RS30085
3069097
3070524
-
Genic
-395
NZ_LR595897.1
3069842
3069854
CCCGCG
12
+
2
CCGCGC
UKMR15_RS30085
3069097
3070524
-
Genic
-745
NZ_LR595897.1
3069894
3069907
AGCGCG
13
+
2
CGCGAG
UKMR15_RS30085
3069097
3070524
-
Genic
-797
NZ_LR595897.1
3069971
3069985
ACGGCG
14
-
2
CGTCGC
UKMR15_RS30085
3069097
3070524
-
Genic
-874
NZ_LR595897.1
3070772
3070786
AGCGCC
14
-
2
GCGCTG
UKMR15_RS30090
3070524
3071225
-
Genic
-248
NZ_LR595897.1
3070849
3070864
ACGCG
15
+
3
ACGCG
UKMR15_RS30090
3070524
3071225
-
Genic
-325
NZ_LR595897.1
3071248
3071262
CCGCGG
14
+
2
CGCGGC
UKMR15_RS30095
3071225
3072724
-
Genic
-23
NZ_LR595897.1
3071258
3071270
CCGGCG
12
+
2
GCCGGC
UKMR15_RS30095
3071225
3072724
-
Genic
-33
NZ_LR595897.1
3071470
3071483
CCGCG
13
-
2
GCGCG
UKMR15_RS30095
3071225
3072724
-
Genic
-245
NZ_LR595897.1
3072708
3072722
ACG
14
-
4
TCG
UKMR15_RS30095
3071225
3072724
-
Genic
-1483
NZ_LR595897.1
3072722
3072734
AACGAT
12
-
2
ATCGTT
UKMR15_RS30095
3071225
3072724
-
Genic
-1497