Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10626 to 10650 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
3083114
3083126
ATCCCG
12
-
2
TCGGGA
UKMR15_RS30110
3083826
3085442
-
Intergenic
700
NZ_LR595897.1
3083331
3083343
CCGCG
12
+
2
GCCGC
UKMR15_RS30110
3083826
3085442
-
Intergenic
483
NZ_LR595897.1
3084171
3084183
CCG
12
-
4
GCG
UKMR15_RS30110
3083826
3085442
-
Genic
-345
NZ_LR595897.1
3085688
3085700
AAAGTC
12
+
2
AAAGTC
UKMR15_RS30110
3083826
3085442
-
Intergenic
-1862
NZ_LR595897.1
3085853
3085866
ACGGCG
13
-
2
CCGTCG
UKMR15_RS30110
3083826
3085442
-
Intergenic
-2027
NZ_LR595897.1
3086292
3086305
CCCGCG
13
+
2
GCGCCC
UKMR15_RS30110
3083826
3085442
-
Intergenic
-2466
NZ_LR595897.1
3088576
3088591
AGCGCG
15
-
2
GCTCGC
UKMR15_RS30120
3088693
3089616
+
Intergenic
102
NZ_LR595897.1
3093475
3093487
AGCCCG
12
+
2
GCCCGA
glnQ
3092870
3093598
-
Genic
-605
NZ_LR595897.1
3093494
3093509
ACC
15
+
5
ACC
glnQ
3092870
3093598
-
Genic
-624
NZ_LR595897.1
3093620
3093632
AAGCG
12
+
2
CGAAG
glnP
3093595
3094287
-
Genic
-25
NZ_LR595897.1
3093627
3093639
AAGCGT
12
+
2
AAGCGT
glnP
3093595
3094287
-
Genic
-32
NZ_LR595897.1
3093740
3093752
ACGCCG
12
+
2
CGCCGA
glnP
3093595
3094287
-
Genic
-145
NZ_LR595897.1
3094010
3094022
AGCGGC
12
+
2
GCAGCG
glnP
3093595
3094287
-
Genic
-415
NZ_LR595897.1
3095022
3095037
AGCGCG
15
+
2
CGAGCG
glnH
3094316
3095068
-
Genic
-706
NZ_LR595897.1
3095460
3095472
CCGGCG
12
+
2
CCGGCG
UKMR15_RS30155
3095515
3096222
-
Intergenic
43
NZ_LR595897.1
3095883
3095895
CCGCG
12
+
2
GCCGC
UKMR15_RS30155
3095515
3096222
-
Genic
-368
NZ_LR595897.1
3096176
3096188
ACGGCG
12
+
2
CGGCGA
UKMR15_RS30155
3095515
3096222
-
Genic
-661
NZ_LR595897.1
3096710
3096722
AGCAGG
12
-
2
GCTCCT
shc
3096229
3098202
-
Genic
-481
NZ_LR595897.1
3096941
3096955
CG
14
+
7
CG
shc
3096229
3098202
-
Genic
-712
NZ_LR595897.1
3097001
3097014
ATCGCC
13
+
2
CCATCG
shc
3096229
3098202
-
Genic
-772
NZ_LR595897.1
3097169
3097183
CG
14
+
7
CG
shc
3096229
3098202
-
Genic
-940
NZ_LR595897.1
3097991
3098003
AGCTCG
12
+
2
GCTCGA
shc
3096229
3098202
-
Genic
-1762
NZ_LR595897.1
3098962
3098974
CCGG
12
+
3
GCCG
hpnD
3098529
3099377
-
Genic
-433
NZ_LR595897.1
3099582
3099596
CCGCG
14
-
2
GCGCG
hpnD
3098529
3099377
-
Intergenic
-1053
NZ_LR595897.1
3101392
3101406
AGCGCG
14
-
2
CTCGCG
UKMR15_RS30180
3100874
3101809
-
Genic
-518