Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10451 to 10475 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
3004937
3004949
AACGC
12
+
2
GCAAC
UKMR15_RS29845
3005050
3007323
-
Intergenic
101
NZ_LR595897.1
3005067
3005079
CCGGCG
12
+
2
GCGCCG
UKMR15_RS29845
3005050
3007323
-
Genic
-17
NZ_LR595897.1
3005883
3005897
AGCGGC
14
+
2
CGGCAG
UKMR15_RS29845
3005050
3007323
-
Genic
-833
NZ_LR595897.1
3006078
3006091
AGGATC
13
+
2
CAGGAT
UKMR15_RS29845
3005050
3007323
-
Genic
-1028
NZ_LR595897.1
3006911
3006927
AGGCGC
16
-
2
GCGCCT
UKMR15_RS29845
3005050
3007323
-
Genic
-1861
NZ_LR595897.1
3006983
3006995
AGCGCG
12
-
2
TCGCGC
UKMR15_RS29845
3005050
3007323
-
Genic
-1933
NZ_LR595897.1
3008126
3008144
ACGGC
18
+
3
CGGCA
UKMR15_RS29850
3007456
3007851
-
Intergenic
-670
NZ_LR595897.1
3008695
3008707
CCGCG
12
+
2
CGCGC
phaZ
3009206
3010477
+
Intergenic
499
NZ_LR595897.1
3009278
3009301
CCCGCG
23
-
3
GCGCGG
phaZ
3009206
3010477
+
Genic
-72
NZ_LR595897.1
3009384
3009396
AGATCG
12
+
2
GATCGA
phaZ
3009206
3010477
+
Genic
-178
NZ_LR595897.1
3010239
3010252
CCGGCG
13
+
2
CGCCGG
phaZ
3009206
3010477
+
Genic
-1033
NZ_LR595897.1
3010857
3010872
AGCGCG
15
-
2
GCGCTC
UKMR15_RS29860
3010693
3012534
+
Genic
-164
NZ_LR595897.1
3010893
3010908
CCGCG
15
-
3
GGCGC
UKMR15_RS29860
3010693
3012534
+
Genic
-200
NZ_LR595897.1
3011076
3011088
AGCGCG
12
-
2
CTCGCG
UKMR15_RS29860
3010693
3012534
+
Genic
-383
NZ_LR595897.1
3011839
3011852
ACGCCG
13
-
2
TCGGCG
UKMR15_RS29860
3010693
3012534
+
Genic
-1146
NZ_LR595897.1
3012625
3012637
CCGCG
12
-
2
CGCGG
UKMR15_RS29865
3012609
3014420
+
Genic
-16
NZ_LR595897.1
3012769
3012781
CCGCG
12
-
2
CGGCG
UKMR15_RS29865
3012609
3014420
+
Genic
-160
NZ_LR595897.1
3013127
3013140
CCCGCG
13
-
2
GGCGCG
UKMR15_RS29865
3012609
3014420
+
Genic
-518
NZ_LR595897.1
3013794
3013806
ACGTCG
12
+
2
ACGTCG
UKMR15_RS29865
3012609
3014420
+
Genic
-1185
NZ_LR595897.1
3013859
3013871
AGCCCG
12
-
2
TCGGGC
UKMR15_RS29865
3012609
3014420
+
Genic
-1250
NZ_LR595897.1
3014121
3014133
AGCGCG
12
-
2
TCGCGC
UKMR15_RS29865
3012609
3014420
+
Genic
-1512
NZ_LR595897.1
3014556
3014576
ACCGC
20
+
4
CCGCA
UKMR15_RS29865
3012609
3014420
+
Intergenic
-1947
NZ_LR595897.1
3014573
3014593
AACGGC
20
+
3
GCAACG
UKMR15_RS29865
3012609
3014420
+
Intergenic
-1964
NZ_LR595897.1
3014841
3014853
AGCCCG
12
+
2
AGCCCG
UKMR15_RS29870
3014925
3015956
+
Intergenic
72
NZ_LR595897.1
3014880
3014893
CCCG
13
+
3
CCCG
UKMR15_RS29870
3014925
3015956
+
Intergenic
32