Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 10276 to 10300 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2902858
2902870
CCGCG
12
+
2
GCCGC
UKMR15_RS29400
2902759
2903967
+
Genic
-99
NZ_LR595897.1
2903033
2903045
ATCGC
12
-
2
CGATG
UKMR15_RS29400
2902759
2903967
+
Genic
-274
NZ_LR595897.1
2903411
2903425
CCCGCG
14
-
2
CGCGGG
UKMR15_RS29400
2902759
2903967
+
Genic
-652
NZ_LR595897.1
2903699
2903712
CG
13
+
6
GC
UKMR15_RS29400
2902759
2903967
+
Genic
-940
NZ_LR595897.1
2904276
2904288
AAGCCG
12
-
2
TTCGGC
UKMR15_RS29405
2903989
2905356
+
Genic
-287
NZ_LR595897.1
2905732
2905745
AGCGGC
13
-
2
GCCGCT
UKMR15_RS29410
2905383
2906360
+
Genic
-349
NZ_LR595897.1
2905747
2905762
ACGGCC
15
+
2
GGCCAC
UKMR15_RS29410
2905383
2906360
+
Genic
-364
NZ_LR595897.1
2906542
2906554
CCGGCG
12
+
2
CGGCGC
UKMR15_RS29415
2906415
2907374
+
Genic
-127
NZ_LR595897.1
2906668
2906680
AGCCGC
12
-
2
GCTGCG
UKMR15_RS29415
2906415
2907374
+
Genic
-253
NZ_LR595897.1
2906743
2906758
AGCGCG
15
-
2
GCTCGC
UKMR15_RS29415
2906415
2907374
+
Genic
-328
NZ_LR595897.1
2907001
2907013
AGCCGC
12
-
2
GCTGCG
UKMR15_RS29415
2906415
2907374
+
Genic
-586
NZ_LR595897.1
2907733
2907752
ACGCC
19
+
3
CGCCA
UKMR15_RS29420
2907809
2908285
-
Intergenic
57
NZ_LR595897.1
2907753
2907766
CCCGCG
13
+
2
CGCGCC
UKMR15_RS29420
2907809
2908285
-
Intergenic
43
NZ_LR595897.1
2908472
2908484
CCGCGG
12
+
2
GCCGCG
UKMR15_RS29425
2908520
2909737
+
Intergenic
36
NZ_LR595897.1
2908669
2908681
CCG
12
-
4
GCG
UKMR15_RS29425
2908520
2909737
+
Genic
-149
NZ_LR595897.1
2909776
2909788
AGGGCG
12
-
2
CCTCGC
UKMR15_RS29425
2908520
2909737
+
Intergenic
-1256
NZ_LR595897.1
2910018
2910030
ACGCGC
12
+
2
CGCACG
UKMR15_RS29430
2909961
2910353
+
Genic
-57
NZ_LR595897.1
2910548
2910560
ATCGCG
12
+
2
CGATCG
UKMR15_RS29430
2909961
2910353
+
Intergenic
-587
NZ_LR595897.1
2912737
2912750
ATCGCG
13
+
2
ATCGCG
UKMR15_RS29440
2911673
2913103
+
Genic
-1064
NZ_LR595897.1
2913138
2913152
CCGCGG
14
+
2
CGGCCG
UKMR15_RS29445
2913180
2913947
-
Intergenic
28
NZ_LR595897.1
2915033
2915045
CCCGCG
12
+
2
CGCCCG
UKMR15_RS29450
2914441
2915997
-
Genic
-592
NZ_LR595897.1
2915407
2915419
ACCGCC
12
-
2
TGGCGG
UKMR15_RS29450
2914441
2915997
-
Genic
-966
NZ_LR595897.1
2915616
2915628
AGGGCG
12
-
2
CTCGCC
UKMR15_RS29450
2914441
2915997
-
Genic
-1175
NZ_LR595897.1
2916327
2916339
AGCGCG
12
+
2
AGCGCG
UKMR15_RS29455
2915976
2917283
-
Genic
-351
NZ_LR595897.1
2916630
2916642
AACGAG
12
-
2
TTCTCG
UKMR15_RS29455
2915976
2917283
-
Genic
-654