Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1226 to 1250 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
770506
770522
CCGCG
16
-
3
GCGGC
tssF
768439
770256
-
Intergenic
-2067
NZ_LR595896.1
770936
770948
ACGGCG
12
+
2
ACGGCG
UKMR15_RS03405
771195
773585
+
Intergenic
247
NZ_LR595896.1
771086
771098
ACACCG
12
+
2
ACCGAC
UKMR15_RS03405
771195
773585
+
Intergenic
97
NZ_LR595896.1
772501
772513
CCCCCG
12
-
2
GGCGGG
UKMR15_RS03405
771195
773585
+
Genic
-1306
NZ_LR595896.1
772770
772784
CG
14
+
7
GC
UKMR15_RS03405
771195
773585
+
Genic
-1575
NZ_LR595896.1
773530
773544
AGCGGC
14
-
2
GCCGCT
UKMR15_RS03405
771195
773585
+
Genic
-2335
NZ_LR595896.1
773669
773729
ACACCG
60
+
10
CCGACA
UKMR15_RS03405
771195
773585
+
Intergenic
-2474
NZ_LR595896.1
773724
773763
ACATCG
39
+
6
CGACAT
UKMR15_RS03410
773894
774868
+
Intergenic
131
NZ_LR595896.1
774682
774698
AAGCCG
16
+
2
CCGAAG
UKMR15_RS03410
773894
774868
+
Genic
-788
NZ_LR595896.1
775589
775601
ATCGGC
12
-
2
ATGCCG
UKMR15_RS03415
775055
776863
-
Genic
-534
NZ_LR595896.1
783420
783432
AACGTC
12
+
2
CAACGT
UKMR15_RS03455
782860
783747
-
Genic
-560
NZ_LR595896.1
785478
785490
AACTC
12
-
2
TTGAG
UKMR15_RS03465
784785
785834
-
Genic
-693
NZ_LR595896.1
786603
786615
AACAAG
12
-
2
TTCTTG
UKMR15_RS03470
786180
787550
-
Genic
-423
NZ_LR595896.1
789404
789416
AAATTG
12
+
2
TGAAAT
UKMR15_RS03485
789386
789682
+
Genic
-18
NZ_LR595896.1
791915
791928
AAAACC
13
-
2
TTTGGT
UKMR15_RS03500
791839
792324
+
Genic
-76
NZ_LR595896.1
792798
792811
AAATG
13
-
2
TTCAT
UKMR15_RS03505
792373
792675
-
Intergenic
-425
NZ_LR595896.1
792821
792833
AAAAC
12
-
2
TTGTT
UKMR15_RS03505
792373
792675
-
Intergenic
-448
NZ_LR595896.1
798297
798309
AGCGCG
12
-
2
TCGCGC
UKMR15_RS03540
797495
799153
-
Genic
-802
NZ_LR595896.1
799571
799583
AGCGCG
12
-
2
CGCTCG
UKMR15_RS03545
799376
800932
-
Genic
-195
NZ_LR595896.1
799647
799661
ACGCGC
14
+
2
CGCGCA
UKMR15_RS03545
799376
800932
-
Genic
-271
NZ_LR595896.1
799899
799913
AGCGCG
14
+
2
GCGCGA
UKMR15_RS03545
799376
800932
-
Genic
-523
NZ_LR595896.1
800487
800500
AGCGGC
13
+
2
GCGGCA
UKMR15_RS03545
799376
800932
-
Genic
-1111
NZ_LR595896.1
801338
801353
CCGCG
15
+
3
CCGCG
UKMR15_RS03550
800956
801699
-
Genic
-382
NZ_LR595896.1
802012
802024
ACGGCG
12
+
2
CGGCGA
recA
801903
802973
+
Genic
-109
NZ_LR595896.1
803132
803145
AAACG
13
-
2
TCGTT
recX
803263
803955
+
Intergenic
118