Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1251 to 1275 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
804458
804472
ACGTCG
14
+
2
CGTCGA
UKMR15_RS03565
804247
804858
+
Genic
-211
NZ_LR595896.1
805739
805751
ATCGCC
12
-
2
TGGCGA
sucC
804938
806104
+
Genic
-801
NZ_LR595896.1
806106
806119
CCCGCG
13
+
2
GCGCCC
sucC
804938
806104
+
Intergenic
-1168
NZ_LR595896.1
806519
806533
AGATCG
14
-
2
CGATCT
sucD
806248
807129
+
Genic
-271
NZ_LR595896.1
806763
806776
AGGCCG
13
-
2
CTCGGC
sucD
806248
807129
+
Genic
-515
NZ_LR595896.1
807653
807665
ATCGCG
12
+
2
GATCGC
UKMR15_RS03580
807280
807993
+
Genic
-373
NZ_LR595896.1
808333
808345
AGCGCG
12
-
2
GCTCGC
UKMR15_RS03585
808212
808730
+
Genic
-121
NZ_LR595896.1
808434
808447
AATCG
13
-
2
TCGAT
UKMR15_RS03585
808212
808730
+
Genic
-222
NZ_LR595896.1
808900
808913
CCCGCG
13
+
2
CGCCCG
UKMR15_RS03590
808968
810755
+
Intergenic
55
NZ_LR595896.1
809714
809726
CG
12
+
6
CG
UKMR15_RS03590
808968
810755
+
Genic
-746
NZ_LR595896.1
810035
810047
AGGCCG
12
-
2
CTCGGC
UKMR15_RS03590
808968
810755
+
Genic
-1067
NZ_LR595896.1
811925
811937
CCGCG
12
+
2
CGCGC
UKMR15_RS03595
811344
811817
+
Intergenic
-581
NZ_LR595896.1
813387
813400
CG
13
+
6
GC
UKMR15_RS03610
813256
814974
+
Genic
-131
NZ_LR595896.1
813989
814001
ATCGCG
12
+
2
CGCGAT
UKMR15_RS03610
813256
814974
+
Genic
-733
NZ_LR595896.1
814495
814507
AGGGCG
12
+
2
GCGAGG
UKMR15_RS03610
813256
814974
+
Genic
-1239
NZ_LR595896.1
814589
814601
CCG
12
+
4
CGC
UKMR15_RS03610
813256
814974
+
Genic
-1333
NZ_LR595896.1
814676
814690
AGGCGC
14
+
2
GCAGGC
UKMR15_RS03610
813256
814974
+
Genic
-1420
NZ_LR595896.1
815071
815083
ACGCGC
12
-
2
TGCGCG
UKMR15_RS03610
813256
814974
+
Intergenic
-1815
NZ_LR595896.1
815350
815362
AACCCG
12
+
2
CGAACC
UKMR15_RS03615
815292
815915
-
Genic
-58
NZ_LR595896.1
815479
815492
ACGATC
13
-
2
GATCGT
UKMR15_RS03615
815292
815915
-
Genic
-187
NZ_LR595896.1
817491
817505
ACCCGC
14
-
2
CGGGTG
waaF
817540
818580
-
Intergenic
35
NZ_LR595896.1
817884
817896
CCGCGG
12
+
2
CGCGGC
waaF
817540
818580
-
Genic
-344
NZ_LR595896.1
818659
818673
CCGG
14
+
3
GCCG
UKMR15_RS03635
818708
818905
-
Intergenic
35
NZ_LR595896.1
818950
818962
CCGCG
12
+
2
GCGCC
UKMR15_RS03640
818971
819894
-
Intergenic
9
NZ_LR595896.1
819323
819335
ACGTCG
12
+
2
CGTCGA
UKMR15_RS03640
818971
819894
-
Genic
-352