Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1726 to 1750 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1111489
1111501
ACGCCG
12
-
2
TCGGCG
UKMR15_RS04940
1105681
1115076
+
Genic
-5808
NZ_LR595896.1
1111848
1111860
AGCCAT
12
+
2
CATAGC
UKMR15_RS04940
1105681
1115076
+
Genic
-6167
NZ_LR595896.1
1112651
1112665
AACGGC
14
+
2
CGGCAA
UKMR15_RS04940
1105681
1115076
+
Genic
-6970
NZ_LR595896.1
1113543
1113555
AACGCG
12
+
2
GCGAAC
UKMR15_RS04940
1105681
1115076
+
Genic
-7862
NZ_LR595896.1
1113637
1113649
ACCGCG
12
-
2
TCGCGG
UKMR15_RS04940
1105681
1115076
+
Genic
-7956
NZ_LR595896.1
1115790
1115802
AGCCGC
12
+
2
AGCCGC
UKMR15_RS04955
1115699
1117456
+
Genic
-91
NZ_LR595896.1
1118987
1119000
ACGCGC
13
-
2
TGCGCG
UKMR15_RS04970
1119187
1119471
+
Intergenic
187
NZ_LR595896.1
1121171
1121186
ACGCG
15
-
3
CGCGT
UKMR15_RS04990
1121240
1122166
-
Intergenic
54
NZ_LR595896.1
1121781
1121794
ATCGC
13
-
2
GCGAT
UKMR15_RS04990
1121240
1122166
-
Genic
-541
NZ_LR595896.1
1124066
1124079
ATCGGC
13
+
2
GCATCG
UKMR15_RS05000
1124218
1124400
-
Intergenic
139
NZ_LR595896.1
1124141
1124154
CCCCG
13
-
2
GCGGG
UKMR15_RS05000
1124218
1124400
-
Intergenic
64
NZ_LR595896.1
1125117
1125129
ACGCTG
12
+
2
ACGCTG
UKMR15_RS05005
1124794
1125201
+
Genic
-323
NZ_LR595896.1
1126141
1126153
AACGAG
12
+
2
CGAGAA
UKMR15_RS05010
1125369
1127315
+
Genic
-772
NZ_LR595896.1
1126759
1126773
ACGAGC
14
-
2
CGTGCT
UKMR15_RS05010
1125369
1127315
+
Genic
-1390
NZ_LR595896.1
1126965
1126977
AGCGCG
12
+
2
AGCGCG
UKMR15_RS05010
1125369
1127315
+
Genic
-1596
NZ_LR595896.1
1127880
1127892
ACGCCC
12
-
2
GGCGTG
parE
1127521
1129503
+
Genic
-359
NZ_LR595896.1
1128305
1128319
AGGGCG
14
+
2
CGAGGG
parE
1127521
1129503
+
Genic
-784
NZ_LR595896.1
1128692
1128706
AGGCGC
14
+
2
GCAGGC
parE
1127521
1129503
+
Genic
-1171
NZ_LR595896.1
1128730
1128742
AAG
12
+
4
AGA
parE
1127521
1129503
+
Genic
-1209
NZ_LR595896.1
1129048
1129060
ATCCGC
12
-
2
CGGATG
parE
1127521
1129503
+
Genic
-1527
NZ_LR595896.1
1129922
1129937
ACGGCG
15
+
2
GCGACG
parC
1129562
1131880
+
Genic
-360
NZ_LR595896.1
1130950
1130962
AAGATC
12
+
2
AAGATC
parC
1129562
1131880
+
Genic
-1388
NZ_LR595896.1
1131453
1131467
AAGCCG
14
-
2
CGGCTT
parC
1129562
1131880
+
Genic
-1891
NZ_LR595896.1
1131735
1131748
ACGGGC
13
+
2
CACGGG
parC
1129562
1131880
+
Genic
-2173
NZ_LR595896.1
1131942
1131955
CCGGCG
13
+
2
CCGGCG
parC
1129562
1131880
+
Intergenic
-2380