Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1776 to 1800 repeats of 10659
Go To:
<<
<
70
71
72
73
74
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1145122
1145135
CCGCG
13
-
2
GCGCG
UKMR15_RS05070
1144248
1145147
-
Genic
-874
NZ_LR595896.1
1146936
1146948
CCGCG
12
-
2
GCGGC
UKMR15_RS05085
1146917
1147825
-
Genic
-19
NZ_LR595896.1
1147878
1147890
AGCCGG
12
+
2
GAGCCG
UKMR15_RS05090
1147926
1148609
-
Intergenic
36
NZ_LR595896.1
1148807
1148819
ACGCTC
12
+
2
ACGCTC
UKMR15_RS05095
1148760
1150214
+
Genic
-47
NZ_LR595896.1
1149051
1149063
CG
12
+
6
GC
UKMR15_RS05095
1148760
1150214
+
Genic
-291
NZ_LR595896.1
1149322
1149335
ACGAGC
13
-
2
GCTCGT
UKMR15_RS05095
1148760
1150214
+
Genic
-562
NZ_LR595896.1
1150046
1150058
CCGCGG
12
+
2
GCCGCG
UKMR15_RS05095
1148760
1150214
+
Genic
-1286
NZ_LR595896.1
1150568
1150580
ACGATC
12
+
2
ACGATC
htpG
1150350
1152248
+
Genic
-218
NZ_LR595896.1
1150588
1150600
ATCGGC
12
+
2
CGGCAT
htpG
1150350
1152248
+
Genic
-238
NZ_LR595896.1
1151019
1151033
ACGAGG
14
+
2
AGGACG
htpG
1150350
1152248
+
Genic
-669
NZ_LR595896.1
1151827
1151841
AGATCG
14
-
2
CGATCT
htpG
1150350
1152248
+
Genic
-1477
NZ_LR595896.1
1151994
1152006
AACGAC
12
+
2
ACGACA
htpG
1150350
1152248
+
Genic
-1644
NZ_LR595896.1
1152680
1152695
AGCGCG
15
-
2
CGCTCG
UKMR15_RS05105
1152248
1152850
+
Genic
-432
NZ_LR595896.1
1153926
1153938
AGCCCG
12
-
2
GCTCGG
UKMR15_RS05115
1153577
1154506
+
Genic
-349
NZ_LR595896.1
1154734
1154746
AGAGCC
12
-
2
CTGGCT
UKMR15_RS05120
1154697
1154936
+
Genic
-37
NZ_LR595896.1
1154949
1154961
AAGACG
12
-
2
CTTCGT
UKMR15_RS05125
1154933
1156483
+
Genic
-16
NZ_LR595896.1
1155145
1155157
CCCGCG
12
-
2
GGCGCG
UKMR15_RS05125
1154933
1156483
+
Genic
-212
NZ_LR595896.1
1155197
1155209
AACGCG
12
-
2
CGTTCG
UKMR15_RS05125
1154933
1156483
+
Genic
-264
NZ_LR595896.1
1155296
1155309
AGCGCG
13
-
2
CGCTCG
UKMR15_RS05125
1154933
1156483
+
Genic
-363
NZ_LR595896.1
1155457
1155470
ACACGT
13
+
2
TACACG
UKMR15_RS05125
1154933
1156483
+
Genic
-524
NZ_LR595896.1
1155540
1155552
ACGATC
12
-
2
CGTGAT
UKMR15_RS05125
1154933
1156483
+
Genic
-607
NZ_LR595896.1
1155723
1155736
ACG
13
-
4
GTC
UKMR15_RS05125
1154933
1156483
+
Genic
-790
NZ_LR595896.1
1155948
1155960
ATCCCG
12
-
2
GATCGG
UKMR15_RS05125
1154933
1156483
+
Genic
-1015
NZ_LR595896.1
1157115
1157127
ACAGTG
12
+
2
AGTGAC
UKMR15_RS05130
1156611
1157045
-
Intergenic
-504
NZ_LR595896.1
1158682
1158695
CCGCG
13
-
2
GCGCG
UKMR15_RS05140
1158763
1159980
-
Intergenic
68