Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1801 to 1825 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1158946
1158958
AGCGCG
12
+
2
AGCGCG
UKMR15_RS05140
1158763
1159980
-
Genic
-183
NZ_LR595896.1
1159337
1159349
AGCGCG
12
+
2
GCGCGA
UKMR15_RS05140
1158763
1159980
-
Genic
-574
NZ_LR595896.1
1159820
1159832
CCGCG
12
-
2
GCGCG
UKMR15_RS05140
1158763
1159980
-
Genic
-1057
NZ_LR595896.1
1161366
1161381
CCGCG
15
-
3
GCGCG
UKMR15_RS05150
1161461
1162303
-
Intergenic
80
NZ_LR595896.1
1162972
1162986
AGCGCG
14
-
2
GCGCTC
UKMR15_RS05160
1162937
1163305
+
Genic
-35
NZ_LR595896.1
1163494
1163506
CCCCCG
12
-
2
GGCGGG
UKMR15_RS05160
1162937
1163305
+
Intergenic
-557
NZ_LR595896.1
1164920
1164932
ACGCGT
12
+
2
TACGCG
UKMR15_RS05170
1164822
1165892
+
Genic
-98
NZ_LR595896.1
1164991
1165003
ACGGCG
12
-
2
CGTCGC
UKMR15_RS05170
1164822
1165892
+
Genic
-169
NZ_LR595896.1
1165004
1165016
CCG
12
+
4
CGC
UKMR15_RS05170
1164822
1165892
+
Genic
-182
NZ_LR595896.1
1165287
1165302
AGCGCG
15
-
2
TCGCGC
UKMR15_RS05170
1164822
1165892
+
Genic
-465
NZ_LR595896.1
1165394
1165406
CCGCGG
12
+
2
GCCGCG
UKMR15_RS05170
1164822
1165892
+
Genic
-572
NZ_LR595896.1
1165417
1165431
AGCGCG
14
-
2
GCTCGC
UKMR15_RS05170
1164822
1165892
+
Genic
-595
NZ_LR595896.1
1167034
1167047
AGCGCG
13
-
2
TCGCGC
rsxB
1166674
1167546
-
Genic
-360
NZ_LR595896.1
1167073
1167085
CG
12
+
6
CG
rsxB
1166674
1167546
-
Genic
-399
NZ_LR595896.1
1167570
1167584
CCGCG
14
-
2
GGCGC
rsxB
1166674
1167546
-
Intergenic
-896
NZ_LR595896.1
1167918
1167930
CCGCG
12
+
2
CGCGC
UKMR15_RS05185
1167804
1168436
+
Genic
-114
NZ_LR595896.1
1168485
1168498
CCGCG
13
+
2
CGCGC
UKMR15_RS05185
1167804
1168436
+
Intergenic
-681
NZ_LR595896.1
1168542
1168555
CCGCG
13
-
2
GCGCG
UKMR15_RS05190
1168579
1170045
-
Intergenic
24
NZ_LR595896.1
1169417
1169430
ACGATG
13
-
2
TCATCG
UKMR15_RS05190
1168579
1170045
-
Genic
-838
NZ_LR595896.1
1170473
1170485
ACGCGC
12
-
2
GCGCGT
UKMR15_RS05195
1170265
1172097
-
Genic
-208
NZ_LR595896.1
1171284
1171296
ACGCG
12
-
2
CGTCG
UKMR15_RS05195
1170265
1172097
-
Genic
-1019
NZ_LR595896.1
1171743
1171755
AGATGC
12
-
2
CTGCAT
UKMR15_RS05195
1170265
1172097
-
Genic
-1478
NZ_LR595896.1
1172343
1172356
AGCGCG
13
-
2
TCGCGC
UKMR15_RS05205
1172274
1173509
+
Genic
-69
NZ_LR595896.1
1173392
1173405
ACAGCG
13
+
2
GACAGC
UKMR15_RS05205
1172274
1173509
+
Genic
-1118
NZ_LR595896.1
1173403
1173416
AACACG
13
-
2
CGTGTT
UKMR15_RS05205
1172274
1173509
+
Genic
-1129