Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1851 to 1875 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1184559
1184571
AGCGCG
12
-
2
CGCTCG
UKMR15_RS05235
1183410
1184858
+
Genic
-1149
NZ_LR595896.1
1184615
1184627
ACCGCG
12
+
2
CGCGAC
UKMR15_RS05235
1183410
1184858
+
Genic
-1205
NZ_LR595896.1
1184641
1184653
CCGG
12
+
3
GCCG
UKMR15_RS05235
1183410
1184858
+
Genic
-1231
NZ_LR595896.1
1184731
1184743
ACGGCG
12
-
2
GCCGTC
UKMR15_RS05235
1183410
1184858
+
Genic
-1321
NZ_LR595896.1
1184844
1184856
ACG
12
-
4
CGT
UKMR15_RS05235
1183410
1184858
+
Genic
-1434
NZ_LR595896.1
1185461
1185473
CCG
12
-
4
GCG
gluQRS
1185350
1186243
-
Genic
-111
NZ_LR595896.1
1186042
1186055
AAGCCG
13
+
2
GAAGCC
gluQRS
1185350
1186243
-
Genic
-692
NZ_LR595896.1
1187574
1187586
ACGCGG
12
+
2
CGGACG
dnaE
1187807
1191331
+
Intergenic
221
NZ_LR595896.1
1188054
1188066
AGC
12
-
4
GCT
dnaE
1187807
1191331
+
Genic
-247
NZ_LR595896.1
1188229
1188241
AGCGCG
12
-
2
CTCGCG
dnaE
1187807
1191331
+
Genic
-422
NZ_LR595896.1
1191050
1191062
ACGCGG
12
+
2
ACGCGG
dnaE
1187807
1191331
+
Genic
-3243
NZ_LR595896.1
1191122
1191136
CCGGCG
14
+
2
CGGCGC
dnaE
1187807
1191331
+
Genic
-3315
NZ_LR595896.1
1191622
1191635
AGCGCG
13
-
2
CTCGCG
msbA
1191371
1193161
+
Genic
-251
NZ_LR595896.1
1192853
1192866
AGCGCC
13
+
2
GCCAGC
msbA
1191371
1193161
+
Genic
-1482
NZ_LR595896.1
1193602
1193614
ACGCGC
12
+
2
ACGCGC
UKMR15_RS05260
1193215
1194297
+
Genic
-387
NZ_LR595896.1
1193764
1193776
AAAGCC
12
-
2
GCTTTG
UKMR15_RS05260
1193215
1194297
+
Genic
-549
NZ_LR595896.1
1193886
1193898
CCGG
12
+
3
GCCG
UKMR15_RS05260
1193215
1194297
+
Genic
-671
NZ_LR595896.1
1195074
1195086
CCGCG
12
+
2
CCGCG
UKMR15_RS05265
1194579
1195724
+
Genic
-495
NZ_LR595896.1
1195338
1195350
AGCCCG
12
-
2
GGCTCG
UKMR15_RS05265
1194579
1195724
+
Genic
-759
NZ_LR595896.1
1196135
1196147
ACGCCG
12
+
2
CGCCGA
UKMR15_RS05270
1195721
1197019
+
Genic
-414
NZ_LR595896.1
1196390
1196404
ATCGCG
14
+
2
TCGCGA
UKMR15_RS05270
1195721
1197019
+
Genic
-669
NZ_LR595896.1
1196442
1196454
AGCGCG
12
+
2
GCGCGA
UKMR15_RS05270
1195721
1197019
+
Genic
-721
NZ_LR595896.1
1196476
1196488
ACGCCG
12
-
2
GCGTCG
UKMR15_RS05270
1195721
1197019
+
Genic
-755
NZ_LR595896.1
1197313
1197325
AGCGCG
12
+
2
AGCGCG
UKMR15_RS05275
1197016
1198278
+
Genic
-297
NZ_LR595896.1
1197440
1197453
AAATCG
13
-
2
CGATTT
UKMR15_RS05275
1197016
1198278
+
Genic
-424