Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1901 to 1925 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1226498
1226510
CCGGCG
12
+
2
GCGCCG
UKMR15_RS05420
1225344
1226318
+
Intergenic
-1154
NZ_LR595896.1
1227210
1227222
AACACG
12
+
2
ACGAAC
kdpA
1226872
1228680
+
Genic
-338
NZ_LR595896.1
1228264
1228277
ACGAGC
13
-
2
TGCTCG
kdpA
1226872
1228680
+
Genic
-1392
NZ_LR595896.1
1228622
1228636
AGCGCG
14
-
2
CGCGCT
kdpA
1226872
1228680
+
Genic
-1750
NZ_LR595896.1
1228713
1228727
CCGG
14
+
3
GCCG
kdpB
1228749
1230836
+
Intergenic
22
NZ_LR595896.1
1228960
1228973
ACAGCC
13
-
2
GCTGTG
kdpB
1228749
1230836
+
Genic
-211
NZ_LR595896.1
1229668
1229680
ACGTCG
12
+
2
CGACGT
kdpB
1228749
1230836
+
Genic
-919
NZ_LR595896.1
1230044
1230056
CCGCG
12
-
2
GCGCG
kdpB
1228749
1230836
+
Genic
-1295
NZ_LR595896.1
1231192
1231204
ACGGGC
12
-
2
GCCCGT
kdpC
1230849
1231430
+
Genic
-343
NZ_LR595896.1
1231251
1231263
CCGCGG
12
+
2
CGGCCG
kdpC
1230849
1231430
+
Genic
-402
NZ_LR595896.1
1231845
1231858
CG
13
+
6
CG
UKMR15_RS05445
1231715
1234696
+
Genic
-130
NZ_LR595896.1
1232026
1232038
ACGAGG
12
-
2
CTCGTC
UKMR15_RS05445
1231715
1234696
+
Genic
-311
NZ_LR595896.1
1232814
1232826
ACCTCG
12
+
2
CGACCT
UKMR15_RS05445
1231715
1234696
+
Genic
-1099
NZ_LR595896.1
1232874
1232890
CG
16
+
8
CG
UKMR15_RS05445
1231715
1234696
+
Genic
-1159
NZ_LR595896.1
1233234
1233247
CCGCG
13
-
2
GCGCG
UKMR15_RS05445
1231715
1234696
+
Genic
-1519
NZ_LR595896.1
1234460
1234472
CCGGCG
12
+
2
CCGGCG
UKMR15_RS05445
1231715
1234696
+
Genic
-2745
NZ_LR595896.1
1234632
1234646
CCGCG
14
+
2
CGCGC
UKMR15_RS05445
1231715
1234696
+
Genic
-2917
NZ_LR595896.1
1234868
1234880
ACGGCG
12
+
2
GACGGC
kdpE
1234689
1235387
+
Genic
-179
NZ_LR595896.1
1235325
1235337
AGCCGC
12
+
2
CGCAGC
kdpE
1234689
1235387
+
Genic
-636
NZ_LR595896.1
1235459
1235476
CCCCCG
17
+
2
CCCCCG
kdpE
1234689
1235387
+
Intergenic
-770
NZ_LR595896.1
1236174
1236186
CCGG
12
+
3
CGGC
UKMR15_RS05455
1235776
1236072
+
Intergenic
-398
NZ_LR595896.1
1237435
1237448
CCGG
13
+
3
GGCC
UKMR15_RS05470
1237414
1240056
+
Genic
-21
NZ_LR595896.1
1237528
1237543
AGCGCG
15
-
2
TCGCGC
UKMR15_RS05470
1237414
1240056
+
Genic
-114
NZ_LR595896.1
1237703
1237715
ACCGCG
12
+
2
CGCGAC
UKMR15_RS05470
1237414
1240056
+
Genic
-289
NZ_LR595896.1
1238368
1238381
ATCGCG
13
+
2
TCGCGA
UKMR15_RS05470
1237414
1240056
+
Genic
-954