Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1951 to 1975 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1250803
1250817
CCGG
14
+
3
GCCG
UKMR15_RS05520
1250840
1251385
-
Intergenic
23
NZ_LR595896.1
1251320
1251332
CCGCG
12
+
2
CGCGC
UKMR15_RS05520
1250840
1251385
-
Genic
-480
NZ_LR595896.1
1251564
1251576
CCCGCG
12
+
2
CGCGCC
UKMR15_RS05525
1251394
1252428
-
Genic
-170
NZ_LR595896.1
1251684
1251697
AACACG
13
+
2
GAACAC
UKMR15_RS05525
1251394
1252428
-
Genic
-290
NZ_LR595896.1
1251971
1251983
AAGCCG
12
+
2
CGAAGC
UKMR15_RS05525
1251394
1252428
-
Genic
-577
NZ_LR595896.1
1252143
1252156
CG
13
+
6
GC
UKMR15_RS05525
1251394
1252428
-
Genic
-749
NZ_LR595896.1
1253268
1253283
CCCG
15
-
3
GGCG
UKMR15_RS05530
1252450
1253388
-
Genic
-818
NZ_LR595896.1
1253949
1253962
CCG
13
-
4
CGG
UKMR15_RS05535
1253479
1253988
-
Genic
-470
NZ_LR595896.1
1254233
1254247
CCGGCG
14
+
2
GCCGGC
UKMR15_RS05540
1253995
1254750
-
Genic
-238
NZ_LR595896.1
1254469
1254482
AAGCGC
13
-
2
TTGCGC
UKMR15_RS05540
1253995
1254750
-
Genic
-474
NZ_LR595896.1
1254515
1254527
AGCGCG
12
+
2
GCGCGA
UKMR15_RS05540
1253995
1254750
-
Genic
-520
NZ_LR595896.1
1255034
1255046
ACGAGC
12
+
2
GCACGA
UKMR15_RS05545
1254781
1255203
-
Genic
-253
NZ_LR595896.1
1255073
1255088
CCGCG
15
-
3
GCGCG
UKMR15_RS05545
1254781
1255203
-
Genic
-292
NZ_LR595896.1
1255226
1255238
AACGCC
12
+
2
CGCCAA
UKMR15_RS05550
1255200
1255760
-
Genic
-26
NZ_LR595896.1
1255435
1255448
ACGGCG
13
-
2
CGCCGT
UKMR15_RS05550
1255200
1255760
-
Genic
-235
NZ_LR595896.1
1255479
1255491
ACG
12
-
4
TCG
UKMR15_RS05550
1255200
1255760
-
Genic
-279
NZ_LR595896.1
1256666
1256678
ACCGG
12
-
2
CCGGT
UKMR15_RS05555
1256156
1257919
+
Genic
-510
NZ_LR595896.1
1259292
1259304
AAGCTG
12
+
2
AGCTGA
ilvC
1258605
1259621
+
Genic
-687
NZ_LR595896.1
1260645
1260658
ATCGCG
13
+
2
CGCGAT
pssA
1260410
1261282
+
Genic
-235
NZ_LR595896.1
1261127
1261139
ACG
12
-
4
TCG
pssA
1260410
1261282
+
Genic
-717
NZ_LR595896.1
1262805
1262817
ACGAGC
12
+
2
GAGCAC
UKMR15_RS05580
1261636
1263183
+
Genic
-1169
NZ_LR595896.1
1263019
1263031
AGGCGC
12
+
2
CGCAGG
UKMR15_RS05580
1261636
1263183
+
Genic
-1383
NZ_LR595896.1
1263284
1263296
CCGCG
12
+
2
CGCGC
UKMR15_RS05585
1263318
1264865
-
Intergenic
22
NZ_LR595896.1
1264426
1264440
ACGGCG
14
-
2
CGTCGC
UKMR15_RS05585
1263318
1264865
-
Genic
-1108
NZ_LR595896.1
1265039
1265052
CCCCCG
13
-
2
GGGGCG
UKMR15_RS05590
1264922
1265557
-
Genic
-117