Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1976 to 2000 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1266550
1266563
ACGCGC
13
-
2
CGCGTG
UKMR15_RS05595
1266001
1266513
-
Intergenic
-549
NZ_LR595896.1
1266751
1266765
ACCG
14
-
3
CGGT
UKMR15_RS05600
1266880
1268157
+
Intergenic
115
NZ_LR595896.1
1267918
1267932
ACCGCG
14
-
2
CGGTCG
UKMR15_RS05600
1266880
1268157
+
Genic
-1038
NZ_LR595896.1
1270417
1270429
AGCGCG
12
-
2
TCGCGC
pnp
1268836
1270977
+
Genic
-1581
NZ_LR595896.1
1270526
1270538
AAGATC
12
+
2
GATCAA
pnp
1268836
1270977
+
Genic
-1690
NZ_LR595896.1
1272397
1272409
ACGCG
12
-
2
GTCGC
UKMR15_RS05620
1272172
1272972
+
Genic
-225
NZ_LR595896.1
1274528
1274540
ACGAGT
12
-
2
TACTCG
UKMR15_RS05640
1274199
1274678
+
Genic
-329
NZ_LR595896.1
1274975
1274989
ACGCGC
14
-
2
TGCGCG
UKMR15_RS05645
1274699
1275301
+
Genic
-276
NZ_LR595896.1
1275385
1275397
AGCTCG
12
+
2
GCTCGA
UKMR15_RS05650
1275312
1276565
+
Genic
-73
NZ_LR595896.1
1275704
1275716
AGCGCG
12
+
2
CGCGAG
UKMR15_RS05650
1275312
1276565
+
Genic
-392
NZ_LR595896.1
1277389
1277401
CCGCGG
12
+
2
CGCGGC
nuoF
1277216
1278526
+
Genic
-173
NZ_LR595896.1
1278346
1278358
ACCTGG
12
+
2
GACCTG
nuoF
1277216
1278526
+
Genic
-1130
NZ_LR595896.1
1280551
1280563
ACGGCG
12
+
2
CGGCGA
UKMR15_RS05665
1278609
1280939
+
Genic
-1942
NZ_LR595896.1
1280789
1280801
ACGCGC
12
-
2
GTGCGC
UKMR15_RS05665
1278609
1280939
+
Genic
-2180
NZ_LR595896.1
1281457
1281472
ACGAGC
15
-
2
GCTCGT
nuoH
1280940
1282004
+
Genic
-517
NZ_LR595896.1
1283335
1283350
ATCGCG
15
+
2
TCGCGA
nuoK
1283293
1283598
+
Genic
-42
NZ_LR595896.1
1283375
1283388
ATC
13
+
4
CAT
nuoK
1283293
1283598
+
Genic
-82
NZ_LR595896.1
1284004
1284016
AGCATC
12
-
2
GATGCT
nuoL
1283616
1285655
+
Genic
-388
NZ_LR595896.1
1284873
1284885
AGCCCG
12
-
2
CGGGCT
nuoL
1283616
1285655
+
Genic
-1257
NZ_LR595896.1
1285129
1285143
ATCGCG
14
+
2
CGCGAT
nuoL
1283616
1285655
+
Genic
-1513
NZ_LR595896.1
1285297
1285310
AGCGCG
13
-
2
GCTCGC
nuoL
1283616
1285655
+
Genic
-1681
NZ_LR595896.1
1285452
1285464
ATCGCG
12
+
2
CGATCG
nuoL
1283616
1285655
+
Genic
-1836
NZ_LR595896.1
1286507
1286519
ACAGCG
12
-
2
TCGCTG
UKMR15_RS05695
1285671
1287161
+
Genic
-836
NZ_LR595896.1
1286622
1286634
AAGATG
12
-
2
TCTTCA
UKMR15_RS05695
1285671
1287161
+
Genic
-951
NZ_LR595896.1
1287318
1287330
CCG
12
-
4
CGG
nuoN
1287201
1288658
+
Genic
-117