Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2026 to 2050 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1305352
1305366
CCG
14
+
4
GCC
UKMR15_RS05795
1305160
1305834
-
Genic
-192
NZ_LR595896.1
1307309
1307321
CCGCG
12
-
2
GCGGC
UKMR15_RS05800
1305901
1306740
-
Intergenic
-1408
NZ_LR595896.1
1314292
1314304
AAGCG
12
-
2
GCTTC
rrf
1314010
1314123
+
Intergenic
-282
NZ_LR595896.1
1314483
1314497
ACGCCG
14
-
2
CGGCGT
rrf
1314010
1314123
+
Intergenic
-473
NZ_LR595896.1
1315142
1315154
CCG
12
+
4
CGC
UKMR15_RS05835
1314919
1316769
+
Genic
-223
NZ_LR595896.1
1318403
1318415
ATCGCG
12
+
2
CGATCG
UKMR15_RS05845
1318175
1319218
+
Genic
-228
NZ_LR595896.1
1319221
1319233
CCCGCG
12
-
2
GCGCGG
UKMR15_RS05845
1318175
1319218
+
Intergenic
-1046
NZ_LR595896.1
1319542
1319555
ACGCGT
13
+
2
CGCGTA
serA
1319538
1320812
+
Genic
-4
NZ_LR595896.1
1320033
1320045
ATCGCG
12
+
2
CGATCG
serA
1319538
1320812
+
Genic
-495
NZ_LR595896.1
1321082
1321094
AATCG
12
+
2
GAATC
UKMR15_RS05855
1321201
1321836
+
Intergenic
107
NZ_LR595896.1
1321754
1321768
ACGGCG
14
-
2
CGCCGT
UKMR15_RS05855
1321201
1321836
+
Genic
-553
NZ_LR595896.1
1323324
1323337
CCGCG
13
+
2
GCGCC
UKMR15_RS05860
1322264
1323289
-
Intergenic
-1060
NZ_LR595896.1
1323872
1323884
CCG
12
+
4
CGC
UKMR15_RS05865
1324178
1325905
+
Intergenic
294
NZ_LR595896.1
1325184
1325198
AGCGCG
14
+
2
CGAGCG
UKMR15_RS05865
1324178
1325905
+
Genic
-1006
NZ_LR595896.1
1326178
1326193
CCGCG
15
-
3
GCGCG
UKMR15_RS05870
1326258
1327499
+
Intergenic
65
NZ_LR595896.1
1327476
1327488
CCGCG
12
+
2
CGCGC
UKMR15_RS05870
1326258
1327499
+
Genic
-1218
NZ_LR595896.1
1328550
1328563
CCCGCG
13
+
2
GCCCGC
UKMR15_RS05875
1327913
1328629
+
Genic
-637
NZ_LR595896.1
1328726
1328738
ACGCGC
12
+
2
CGCGCA
UKMR15_RS05880
1328629
1329921
+
Genic
-97
NZ_LR595896.1
1329903
1329915
AGCGG
12
-
2
TCCGC
UKMR15_RS05880
1328629
1329921
+
Genic
-1274
NZ_LR595896.1
1330015
1330029
AGCGCG
14
-
2
GCGCTC
UKMR15_RS05885
1329929
1330111
+
Genic
-86
NZ_LR595896.1
1330033
1330046
ACCGCG
13
+
2
ACCGCG
UKMR15_RS05885
1329929
1330111
+
Genic
-104
NZ_LR595896.1
1330968
1330980
AGCCG
12
-
2
GGCTC
UKMR15_RS05895
1330683
1332308
+
Genic
-285
NZ_LR595896.1
1331079
1331091
ACG
12
-
4
TCG
UKMR15_RS05895
1330683
1332308
+
Genic
-396
NZ_LR595896.1
1331979
1331991
ACGACT
12
+
2
ACTACG
UKMR15_RS05895
1330683
1332308
+
Genic
-1296
NZ_LR595896.1
1333096
1333108
CCGCG
12
-
2
GGCGC
UKMR15_RS05900
1332305
1333093
+
Intergenic
-791