Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2076 to 2100 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1352932
1352944
ACCGCG
12
-
2
GTCGCG
UKMR15_RS05960
1352684
1353325
+
Genic
-248
NZ_LR595896.1
1352985
1352997
ACG
12
-
4
CGT
UKMR15_RS05960
1352684
1353325
+
Genic
-301
NZ_LR595896.1
1353077
1353089
AGCGCG
12
-
2
TCGCGC
UKMR15_RS05960
1352684
1353325
+
Genic
-393
NZ_LR595896.1
1353435
1353447
CCCCGG
12
-
2
GCCGGG
UKMR15_RS05960
1352684
1353325
+
Intergenic
-751
NZ_LR595896.1
1353832
1353845
AATGAG
13
-
2
TTCTCA
UKMR15_RS05965
1354110
1354766
-
Intergenic
265
NZ_LR595896.1
1355804
1355816
AGC
12
+
4
AGC
UKMR15_RS05975
1355519
1356289
-
Genic
-285
NZ_LR595896.1
1355939
1355951
CCGCG
12
-
2
GCGCG
UKMR15_RS05975
1355519
1356289
-
Genic
-420
NZ_LR595896.1
1356747
1356760
AGCGCG
13
+
2
GCGAGC
UKMR15_RS05980
1356300
1358012
-
Genic
-447
NZ_LR595896.1
1357036
1357048
ACGGCG
12
+
2
CGACGG
UKMR15_RS05980
1356300
1358012
-
Genic
-736
NZ_LR595896.1
1357080
1357092
CCGCG
12
+
2
GCCGC
UKMR15_RS05980
1356300
1358012
-
Genic
-780
NZ_LR595896.1
1357095
1357107
CCGCG
12
-
2
CGGCG
UKMR15_RS05980
1356300
1358012
-
Genic
-795
NZ_LR595896.1
1357162
1357176
AGCGCG
14
+
2
CGAGCG
UKMR15_RS05980
1356300
1358012
-
Genic
-862
NZ_LR595896.1
1357618
1357630
AACGCG
12
+
2
ACGCGA
UKMR15_RS05980
1356300
1358012
-
Genic
-1318
NZ_LR595896.1
1358281
1358293
AACGCG
12
-
2
TTCGCG
UKMR15_RS05985
1358002
1359057
-
Genic
-279
NZ_LR595896.1
1360920
1360932
AGCCG
12
+
2
GCCGA
UKMR15_RS05995
1359618
1360982
-
Genic
-1302
NZ_LR595896.1
1361027
1361040
AGCGCG
13
-
2
GCGCTC
UKMR15_RS06000
1360979
1361170
-
Genic
-48
NZ_LR595896.1
1361140
1361152
AAAGG
12
+
2
GGAAA
UKMR15_RS06000
1360979
1361170
-
Genic
-161
NZ_LR595896.1
1361369
1361381
AGGCCG
12
-
2
CGGCCT
UKMR15_RS06005
1361167
1363443
-
Genic
-202
NZ_LR595896.1
1361839
1361851
ATCGCG
12
+
2
GCGATC
UKMR15_RS06005
1361167
1363443
-
Genic
-672
NZ_LR595896.1
1364204
1364216
AGCTCG
12
+
2
GCTCGA
recC
1364068
1367412
+
Genic
-136
NZ_LR595896.1
1364699
1364711
CG
12
+
6
CG
recC
1364068
1367412
+
Genic
-631
NZ_LR595896.1
1365556
1365568
CCGCG
12
+
2
CCGCG
recC
1364068
1367412
+
Genic
-1488
NZ_LR595896.1
1366438
1366450
CG
12
+
6
GC
recC
1364068
1367412
+
Genic
-2370
NZ_LR595896.1
1366483
1366495
AGCCCG
12
+
2
CCGAGC
recC
1364068
1367412
+
Genic
-2415
NZ_LR595896.1
1366843
1366855
AACGCG
12
-
2
CGTTCG
recC
1364068
1367412
+
Genic
-2775