Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2051 to 2075 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1333603
1333615
AACGGC
12
-
2
CGTTGC
UKMR15_RS05905
1333681
1335135
-
Intergenic
66
NZ_LR595896.1
1334118
1334131
AGCGCG
13
+
2
CGCGAG
UKMR15_RS05905
1333681
1335135
-
Genic
-437
NZ_LR595896.1
1334790
1334803
CCGCG
13
-
2
GCGGC
UKMR15_RS05905
1333681
1335135
-
Genic
-1109
NZ_LR595896.1
1335324
1335341
AGCTCG
17
+
2
CGAGCT
UKMR15_RS05910
1335170
1337005
-
Genic
-154
NZ_LR595896.1
1336388
1336400
AGC
12
+
4
AGC
UKMR15_RS05910
1335170
1337005
-
Genic
-1218
NZ_LR595896.1
1336732
1336744
ACGCTG
12
-
2
CAGCGT
UKMR15_RS05910
1335170
1337005
-
Genic
-1562
NZ_LR595896.1
1338044
1338057
CCGCG
13
+
2
GCGCC
UKMR15_RS05920
1338282
1338911
-
Intergenic
225
NZ_LR595896.1
1338079
1338092
CCGCG
13
+
2
GCGCC
UKMR15_RS05920
1338282
1338911
-
Intergenic
190
NZ_LR595896.1
1338179
1338202
AACGC
23
-
4
GCGTT
UKMR15_RS05920
1338282
1338911
-
Intergenic
80
NZ_LR595896.1
1338218
1338230
CCGCG
12
-
2
CGGCG
UKMR15_RS05920
1338282
1338911
-
Intergenic
52
NZ_LR595896.1
1339225
1339239
CCG
14
-
4
CGG
UKMR15_RS05925
1339527
1342829
-
Intergenic
288
NZ_LR595896.1
1339664
1339677
ATCGCG
13
+
2
CGCGAT
UKMR15_RS05925
1339527
1342829
-
Genic
-137
NZ_LR595896.1
1340052
1340064
AGGATC
12
+
2
AGGATC
UKMR15_RS05925
1339527
1342829
-
Genic
-525
NZ_LR595896.1
1341382
1341397
ACGCTC
15
-
2
GCGTGA
UKMR15_RS05925
1339527
1342829
-
Genic
-1855
NZ_LR595896.1
1341770
1341784
AACAGG
14
+
2
CAGGAA
UKMR15_RS05925
1339527
1342829
-
Genic
-2243
NZ_LR595896.1
1342187
1342199
AACGCG
12
-
2
GTTCGC
UKMR15_RS05925
1339527
1342829
-
Genic
-2660
NZ_LR595896.1
1342964
1342976
ATCGCG
12
+
2
CGCGAT
UKMR15_RS05930
1342830
1345940
-
Genic
-134
NZ_LR595896.1
1345355
1345369
AGCGCG
14
+
2
CGCGAG
UKMR15_RS05930
1342830
1345940
-
Genic
-2525
NZ_LR595896.1
1347246
1347259
AGCGGG
13
+
2
GCGGGA
UKMR15_RS05940
1347773
1348600
-
Intergenic
514
NZ_LR595896.1
1347975
1347989
ATCGCG
14
+
2
CGATCG
UKMR15_RS05940
1347773
1348600
-
Genic
-202
NZ_LR595896.1
1348798
1348810
AAACGG
12
+
2
CGGAAA
UKMR15_RS05940
1347773
1348600
-
Intergenic
-1025
NZ_LR595896.1
1348993
1349006
ACCCC
13
-
2
GGGGT
UKMR15_RS05945
1349148
1351109
-
Intergenic
142
NZ_LR595896.1
1350051
1350065
CCCGCG
14
+
2
GCGCCC
UKMR15_RS05945
1349148
1351109
-
Genic
-903
NZ_LR595896.1
1351247
1351259
CCGCG
12
+
2
CGCGC
UKMR15_RS05945
1349148
1351109
-
Intergenic
-2099
NZ_LR595896.1
1351508
1351520
CCG
12
+
4
CGC
UKMR15_RS05950
1351426
1351881
+
Genic
-82