Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5451 to 5475 repeats of 1284974
Go To:
<<
<
217
218
219
220
221
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
3947335
3947347
AAAC
12
-
3
GTTT
ENSGALT00000105830.1
3908684
4026387
+
Intron
38651
chr1
3948349
3948361
AC
12
-
6
TG
ENSGALT00000105830.1
3908684
4026387
+
Intron
39665
chr1
3954600
3954612
AAAACC
12
-
2
TTGGTT
ENSGALT00000105830.1
3908684
4026387
+
Intron
45916
chr1
3955409
3955421
AAAAAG
12
-
2
TTCTTT
ENSGALT00000105830.1
3908684
4026387
+
Intron
46725
chr1
3957756
3957768
ACAGAG
12
+
2
ACAGAG
ENSGALT00000105830.1
3908684
4026387
+
Intron
49072
chr1
3958021
3958033
A
12
+
12
A
ENSGALT00000105830.1
3908684
4026387
+
Intron
49337
chr1
3958762
3958774
AAAGAT
12
+
2
AAAGAT
ENSGALT00000105830.1
3908684
4026387
+
Intron
50078
chr1
3960171
3960183
ACCCTC
12
-
2
GAGGGT
ENSGALT00000105830.1
3908684
4026387
+
Intron
51487
chr1
3960755
3960768
AACCCT
13
-
2
AGGGTT
ENSGALT00000105830.1
3908684
4026387
+
Intron
52071
chr1
3961122
3961134
ACAGAG
12
-
2
TCTCTG
ENSGALT00000105830.1
3908684
4026387
+
Intron
52438
chr1
3963861
3963875
AAAC
14
-
3
TTGT
ENSGALT00000105830.1
3908684
4026387
+
Intron
55177
chr1
3964302
3964314
AAAGG
12
-
2
TTTCC
ENSGALT00000105830.1
3908684
4026387
+
Intron
55618
chr1
3965051
3965065
AAAAAC
14
-
2
TTGTTT
ENSGALT00000105830.1
3908684
4026387
+
Intron
56367
chr1
3965373
3965385
AGCATC
12
-
2
TGCTGA
ENSGALT00000105830.1
3908684
4026387
+
Intron
56689
chr1
3966021
3966034
AAAAG
13
-
2
TTTCT
ENSGALT00000105830.1
3908684
4026387
+
Intron
57337
chr1
3967730
3967744
AAAAAG
14
+
2
AAAAGA
ENSGALT00000105830.1
3908684
4026387
+
Intron
59046
chr1
3969362
3969375
ACACAT
13
-
2
GTGTAT
ENSGALT00000105830.1
3908684
4026387
+
Intron
60678
chr1
3970352
3970364
AAAAC
12
+
2
AAACA
ENSGALT00000105830.1
3908684
4026387
+
Intron
61668
chr1
3970946
3970958
A
12
+
12
A
ENSGALT00000105830.1
3908684
4026387
+
Intron
62262
chr1
3971530
3971544
C
14
-
14
G
ENSGALT00000105830.1
3908684
4026387
+
Intron
62846
chr1
3971687
3971699
AAGGGG
12
-
2
CTTCCC
ENSGALT00000105830.1
3908684
4026387
+
Intron
63003
chr1
3974766
3974778
AATCAG
12
+
2
ATCAGA
ENSGALT00000105830.1
3908684
4026387
+
Intron
66082
chr1
3976162
3976181
A
19
-
19
T
ENSGALT00000105830.1
3908684
4026387
+
Intron
67478
chr1
3976383
3976397
AAAAAT
14
-
2
TTTATT
ENSGALT00000105830.1
3908684
4026387
+
Intron
67699
chr1
3977203
3977218
A
15
-
15
T
ENSGALT00000105830.1
3908684
4026387
+
Intron
68519