MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3176 to 3200 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2207195 2207207 AAGTGG 12 - 2 TTCCAC NDA1 2204104 2207099 + Intergenic 3091
NC_003070.9 2207260 2207272 A 12 + 12 A NDA1 2204104 2207099 + Intergenic 3156
NC_003070.9 2207485 2207504 C 19 - 19 G NDA1 2204104 2207099 + Intergenic 3381
NC_003070.9 2207768 2207782 A 14 + 14 A AT1G07190 2208013 2208177 + Intergenic -231
NC_003070.9 2208252 2208266 AAAAT 14 + 2 AAATA AT1G07190 2208013 2208177 + Intergenic 239
NC_003070.9 2208323 2208335 AAGGAG 12 + 2 AGAAGG AT1G07200 2208477 2212718 - Intergenic 4383
NC_003070.9 2208482 2208496 AAAAGG 14 - 2 TTTCCT AT1G07200 2208477 2212718 - Genic 4222
NC_003070.9 2208650 2208662 ATC 12 - 4 GAT AT1G07200 2208477 2212718 - Genic 4056
NC_003070.9 2210809 2210821 AACATC 12 - 2 TTGATG AT1G07200 2208477 2212718 - Genic 1897
NC_003070.9 2212459 2212471 A 12 + 12 A AT1G07200 2208477 2212718 - Genic 247
NC_003070.9 2213460 2213474 AAAT 14 - 3 TTTA AT1G07200 2208477 2212718 - Intergenic -742
NC_003070.9 2213727 2213741 AAATC 14 - 2 TTTGA AT1G07200 2208477 2212718 - Intergenic -1009
NC_003070.9 2214854 2214866 AAAAAG 12 + 2 AGAAAA AT1G07210 2215216 2216982 + Intergenic -350
NC_003070.9 2214877 2214889 AAAAAC 12 - 2 TTGTTT AT1G07210 2215216 2216982 + Intergenic -327
NC_003070.9 2214882 2214894 AAAC 12 - 3 TTTG AT1G07210 2215216 2216982 + Intergenic -322
NC_003070.9 2215151 2215163 AAAAAT 12 + 2 AATAAA AT1G07210 2215216 2216982 + Intergenic -53
NC_003070.9 2215156 2215168 AAAT 12 + 3 AAAT AT1G07210 2215216 2216982 + Intergenic -48
NC_003070.9 2215251 2215263 ACAGAG 12 - 2 GTCTCT AT1G07210 2215216 2216982 + Genic 35
NC_003070.9 2215407 2215419 AACGCC 12 + 2 CCAACG AT1G07210 2215216 2216982 + Genic 191
NC_003070.9 2215491 2215504 AATCG 13 + 2 GAATC AT1G07210 2215216 2216982 + Genic 275
NC_003070.9 2216631 2216646 ATC 15 - 5 TGA AT1G07210 2215216 2216982 + Genic 1415
NC_003070.9 2216833 2216845 AATCCT 12 - 2 AGGATT AT1G07210 2215216 2216982 + Genic 1617
NC_003070.9 2219387 2219404 AAAAAG 17 - 2 TTCTTT AT1G07220 2216925 2219649 - Genic 245
NC_003070.9 2219598 2219610 AAAATT 12 + 2 TTAAAA AT1G07220 2216925 2219649 - Genic 39
NC_003070.9 2219662 2219674 ACT 12 + 4 TAC AT1G07220 2216925 2219649 - Intergenic -13