MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3201 to 3225 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2220281 2220293 AAGGAT 12 + 2 AGGATA NPC1 2220181 2223018 - Exon 2725
NC_003070.9 2220331 2220343 AGATGG 12 + 2 ATGGAG NPC1 2220181 2223018 - Exon 2675
NC_003070.9 2221045 2221057 AACTGT 12 + 2 AACTGT NPC1 2220181 2223018 - Intron 1961
NC_003070.9 2222587 2222600 ACCCG 13 - 2 TCGGG NPC1 2220181 2223018 - Exon 418
NC_003070.9 2223429 2223441 AAAATC 12 - 2 GATTTT UGT71C5 2223625 2225524 + Intergenic -184
NC_003070.9 2223526 2223538 ACCAGT 12 + 2 CCAGTA UGT71C5 2223625 2225524 + Intergenic -87
NC_003070.9 2224212 2224226 ATC 14 + 4 TCA UGT71C5 2223625 2225524 + Exon 587
NC_003070.9 2225376 2225388 AAAAAT 12 + 2 AATAAA UGT71C5 2223625 2225524 + Exon 1751
NC_003070.9 2226285 2226300 ACGCG 15 - 3 CGTCG UGT71C4 2225759 2227608 + Exon 526
NC_003070.9 2228822 2228834 AACCG 12 + 2 CGAAC UGT71C3 2227594 2229357 - Exon 523
NC_003070.9 2229058 2229071 ACCATC 13 - 2 GATGGT UGT71C3 2227594 2229357 - Exon 286
NC_003070.9 2229161 2229174 AAGCAG 13 - 2 TCTGCT UGT71C3 2227594 2229357 - Exon 183
NC_003070.9 2229861 2229875 AAAAT 14 + 2 AAAAT AT1G07270 2229444 2233017 - Genic 3142
NC_003070.9 2230653 2230665 AAGGTC 12 - 2 CCTTGA AT1G07270 2229444 2233017 - Genic 2352
NC_003070.9 2230760 2230772 AAATAG 12 - 2 TTTCTA AT1G07270 2229444 2233017 - Genic 2245
NC_003070.9 2232241 2232253 AACTGG 12 - 2 TTCCAG AT1G07270 2229444 2233017 - Genic 764
NC_003070.9 2233157 2233176 AAAAAC 19 - 3 TTTTTG AT1G07270 2229444 2233017 - Intergenic -140
NC_003070.9 2233266 2233278 A 12 + 12 A AT1G07270 2229444 2233017 - Intergenic -249
NC_003070.9 2233417 2233431 AAAAC 14 + 2 AAAAC AT1G07270 2229444 2233017 - Intergenic -400
NC_003070.9 2233904 2233917 ACTAT 13 - 2 ATAGT AT1G07270 2229444 2233017 - Intergenic -887
NC_003070.9 2233992 2234004 AACAAT 12 - 2 TGTTAT AT1G07270 2229444 2233017 - Intergenic -975
NC_003070.9 2235016 2235028 AATT 12 + 3 TTAA AT1G07270 2229444 2233017 - Intergenic -1999
NC_003070.9 2236005 2236017 AAATT 12 - 2 TAATT AT1G07280 2238017 2241471 + Intergenic -2000
NC_003070.9 2236235 2236247 AAAGC 12 + 2 AGCAA AT1G07280 2238017 2241471 + Intergenic -1770
NC_003070.9 2236411 2236423 AAACTG 12 + 2 GAAACT AT1G07280 2238017 2241471 + Intergenic -1594