MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3151 to 3175 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2189154 2189168 AAAATT 14 - 2 TTAATT AT1G07128 2187566 2188734 - Intergenic -420
NC_003070.9 2189841 2189853 AAT 12 + 4 AAT AT1G07135 2189877 2190784 - Intergenic 931
NC_003070.9 2190839 2190853 AAATAT 14 - 2 ATATTT AT1G07135 2189877 2190784 - Intergenic -55
NC_003070.9 2191981 2191993 A 12 + 12 A SIRANBP 2191679 2193836 - Exon 1843
NC_003070.9 2192257 2192269 AGAT 12 + 3 ATAG SIRANBP 2191679 2193836 - Exon 1567
NC_003070.9 2193658 2193671 ACGAGC 13 - 2 GTGCTC SIRANBP 2191679 2193836 - Exon 165
NC_003070.9 2194400 2194412 AAAC 12 + 3 CAAA MAPKKK13 2193941 2195996 - Exon 1584
NC_003070.9 2194849 2194864 AAG 15 - 5 TCT MAPKKK13 2193941 2195996 - Exon 1132
NC_003070.9 2196365 2196378 AAAACG 13 - 2 TCGTTT MAPKKK13 2193941 2195996 - Intergenic -369
NC_003070.9 2197149 2197161 ACCACT 12 - 2 TGGTAG AT1G07160 2197854 2199773 - Intergenic 2612
NC_003070.9 2197754 2197766 AAAAGT 12 + 2 GTAAAA AT1G07160 2197854 2199773 - Intergenic 2007
NC_003070.9 2198979 2198991 A 12 - 12 T AT1G07160 2197854 2199773 - Genic 782
NC_003070.9 2199571 2199583 AACCCT 12 - 2 AGGGTT AT1G07160 2197854 2199773 - Genic 190
NC_003070.9 2199844 2199860 AAG 16 - 5 CTT AT1G07160 2197854 2199773 - Intergenic -71
NC_003070.9 2202284 2202296 AAATGG 12 - 2 CATTTC AT1G07175 2202278 2203366 + Genic 6
NC_003070.9 2202368 2202382 AAGAG 14 + 2 AAGAG AT1G07175 2202278 2203366 + Genic 90
NC_003070.9 2202459 2202471 AAAATG 12 - 2 TTTTCA AT1G07175 2202278 2203366 + Genic 181
NC_003070.9 2202771 2202783 AAAT 12 + 3 TAAA AT1G07175 2202278 2203366 + Genic 493
NC_003070.9 2202786 2202799 AAAAAT 13 + 2 ATAAAA AT1G07175 2202278 2203366 + Genic 508
NC_003070.9 2203071 2203083 AAAAAT 12 + 2 AAAAAT AT1G07175 2202278 2203366 + Genic 793
NC_003070.9 2203218 2203232 AAAAT 14 - 2 TTTTA AT1G07175 2202278 2203366 + Genic 940
NC_003070.9 2203223 2203235 AAAAAT 12 - 2 TTTTAT AT1G07175 2202278 2203366 + Genic 945
NC_003070.9 2204064 2204076 AAAAT 12 - 2 TTATT NDA1 2204104 2207099 + Intergenic -28
NC_003070.9 2205085 2205097 AAACGC 12 + 2 AAACGC NDA1 2204104 2207099 + Intron 981
NC_003070.9 2205101 2205113 AAACAC 12 - 2 TTTGTG NDA1 2204104 2207099 + Intron 997